SSDB Paralog Search Result

KEGG ID :pcs:Pc16g06150 (565 a.a.)
Definition:Pc16g06150; K01176 alpha-amylase
Update status:T01091 (abp,abv,adl,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gtr,hlr,lmox,mlr,mrr,mtut,mtuu,npa,oas,pco,pes,pfp,psq,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pcs:Pc06g01090 Pc06g01090                                K01176     524    2187     504    0.585    506     
pcs:Pc16g06140 Pc16g06140                                           547     213      54    0.220    513     
pcs:Pc12g06430 Pc12g06430                                           468     212      54    0.247    361     
pcs:Pc15g01900 Pc15g01900                                K03635     762     189      49    0.220    381     
pcs:Pc20g12650 Pc20g12650                                K01187     584     170      45    0.209    512     
pcs:Pc16g00630 Pc16g00630                                K01176     623     169      44    0.220    359     
pcs:Pc22g12340 Pc22g12340                                K01176     495     166      44    0.218    308     
pcs:Pc22g07880 Pc22g07880                                           577     155      41    0.230    304     
pcs:Pc13g06060 Pc13g06060                                K05285    1018     104      30    0.230    265     
pcs:Pc16g14610 Pc16g14610                                           583     104      30    0.194    392     
pcs:Pc13g05070 hypothetical protein                                 480     102      29    0.188    224     
pcs:Pc14g01800 Pc14g01800                                           824     102      29    0.243    288     
pcs:Pc20g13420 Pc20g13420                                K00833     786     102      29    0.263    171     
pcs:Pc12g13500 Pc12g13500                                K00850     782     100      29    0.242    252     
pcs:Pc21g02490 Pc21g02490                                          1431     100      29    0.245    163     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]