SSDB Paralog Search Result

KEGG ID :pdx:Psed_2901 (346 a.a.)
Definition:DNA polymerase LigD, polymerase domain-containing protein
Update status:T01479 (agn,ars,bhz,camu,ccro,cey,deq,edl,ery,leg,lko,lst,metc,meu,mgo,otm,ptv,pyw,ruf,ssch,wma,yak : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pdx:Psed_4714 DNA primase small subunit                             323    1090     254    0.518    313     
pdx:Psed_4989 DNA ligase D                               K01971     683     585     139    0.356    278     
pdx:Psed_3272 DNA polymerase LigD, polymerase domain-co  K01971     661     552     132    0.371    291     
pdx:Psed_0303 DNA polymerase LigD, polymerase domain-co             325     484     116    0.351    279     
pdx:Psed_6556 hypothetical protein                                  418     114      32    0.310    113     
pdx:Psed_0982 fibronectin-attachment family protein                 119     111      31    0.397    68      
pdx:Psed_1901 acylaminoacyl-peptidase                               643     111      31    0.304    112     
pdx:Psed_2403 DNA ligase D                                           70     111      31    0.355    62      
pdx:Psed_5788 peptidase S14 ClpP                                    433     109      31    0.330    97      
pdx:Psed_5440 hypothetical protein                       K18481     383     107      30    0.319    119     
pdx:Psed_3168 hypothetical protein                                  375     104      30    0.347    124     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]