SSDB Paralog Search Result

KEGG ID :pdx:Psed_3272 (661 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01479 (acv,anl,aoa,boe,bter,cart,cbot,dva,erb,fpla,gta,kor,lacy,ndk,nia,pana,pary,pll,proc,rbm,rhn,ruk,serj,sphb,srz,woc : calculation not yet completed)
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Search Result : 49 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pdx:Psed_2901 DNA polymerase LigD, polymerase domain pr             346     552     132    0.371    291     
pdx:Psed_0303 DNA polymerase LigD, polymerase domain pr             325     540     129    0.375    283     
pdx:Psed_4714 DNA primase small subunit                             323     512     123    0.341    299     
pdx:Psed_4989 DNA ligase D                               K01971     683     503     121    0.272    703     
pdx:Psed_0328 ATP dependent DNA ligase                   K01971     310     323      79    0.322    311     
pdx:Psed_3144 histidine kinase internal region           K01971     602     282      70    0.279    552     
pdx:Psed_6303 ATP-dependent DNA ligase                              118     249      63    0.346    127     
pdx:Psed_0956 DNA ligase (EC:6.5.1.1)                    K10747     513     185      48    0.286    311     
pdx:Psed_3685 protein of unknown function UPF0089                   866     173      45    0.270    433     
pdx:Psed_3009 histidine kinase                                     1850     163      43    0.250    503     
pdx:Psed_0715 GAF sensor signal transduction histidine              547     157      42    0.284    349     
pdx:Psed_5724 histidine kinase                                     1778     153      41    0.254    615     
pdx:Psed_0252 amino acid adenylation domain protein (EC            7912     152      40    0.255    601     
pdx:Psed_4806 hypothetical protein                                 1245     150      40    0.278    388     
pdx:Psed_5542 transcriptional regulator, putative ATPas             999     148      40    0.302    358     
pdx:Psed_4603 DEAD/H associated domain protein           K03724    1590     133      36    0.321    215     
pdx:Psed_5917 Long-chain-fatty-acid--CoA ligase (EC:6.2  K12508     633     129      35    0.328    125     
pdx:Psed_5174 hypothetical protein                                  517     122      34    0.323    186     
pdx:Psed_2723 Magnesium chelatase (EC:6.6.1.1)           K03404     755     118      33    0.303    396     
pdx:Psed_1701 Methyltransferase type 11                             244     116      32    0.311    122     
pdx:Psed_0961 hypothetical protein                                  252     111      31    0.309    139     
pdx:Psed_5885 regulatory protein TetR                               198     109      31    0.341    91      
pdx:Psed_5942 Protein of unknown function DUF2064        K09931     223     109      31    0.375    64      
pdx:Psed_0450 hypothetical protein                                  802     108      30    0.301    113     
pdx:Psed_3837 DNA alkylation repair enzyme                          264     108      30    0.341    85      
pdx:Psed_6225 Uncharacterized conserved protein UCP0075             375     108      30    0.342    111     
pdx:Psed_1537 Amidase                                    K01426     444     107      30    0.322    245     
pdx:Psed_3608 NUDIX hydrolase                                       186     107      30    0.314    172     
pdx:Psed_3859 transcriptional regulator, LysR family                304     107      30    0.309    181     
pdx:Psed_0135 NAD-dependent epimerase/dehydratase                   218     106      30    0.324    170     
pdx:Psed_3893 Anthranilate synthase., Aminodeoxychorism  K03342     704     106      30    0.319    210     
pdx:Psed_1634 putative phytochrome sensor protein                   509     105      30    0.356    104     
pdx:Psed_3138 protein of unknown function DUF742                    195     105      30    0.321    140     
pdx:Psed_5622 oxidoreductase molybdopterin binding prot             606     105      30    0.329    149     
pdx:Psed_6634 Protein of unknown function DUF2339, tran             718     105      30    0.327    101     
pdx:Psed_0296 Formyl-CoA transferase (EC:2.8.3.16)                  410     104      30    0.309    139     
pdx:Psed_5142 histidine kinase                                      492     104      30    0.341    182     
pdx:Psed_5213 hypothetical protein                                  549     104      30    0.301    346     
pdx:Psed_5481 Patatin                                               338     104      30    0.301    186     
pdx:Psed_3223 alpha/beta hydrolase fold-3 domain-contai             341     103      29    0.366    101     
pdx:Psed_4014 exodeoxyribonuclease V, gamma subunit (EC  K03583    1124     103      29    0.302    149     
pdx:Psed_3973 ribonuclease II                                       474     102      29    0.307    166     
pdx:Psed_1109 peptidase S1 and S6 chymotrypsin/Hap       K08372     360     101      29    0.311    151     
pdx:Psed_2324 multi-sensor signal transduction histidin            1859     101      29    0.333    105     
pdx:Psed_2330 protein of unknown function DUF6 transmem             295     101      29    0.304    112     
pdx:Psed_3568 lipolytic protein G-D-S-L family                      431     100      29    0.301    229     
pdx:Psed_4507 adenylylsulfate reductase, thioredoxin de  K00390     234     100      29    0.365    74      
pdx:Psed_5303 9-cis-epoxycarotenoid dioxygenase (EC:1.1  K11159     483     100      29    0.339    109     
pdx:Psed_6505 beta-lactamase domain protein                         265     100      29    0.311    225     

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