SSDB Paralog Search Result

KEGG ID :pdx:Psed_3272 (661 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01479 (aoa,avu,bgy,bhu,boe,btho,jaz,myz,xho : calculation not yet completed)
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Search Result : 49 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
pdx:Psed_2901 DNA polymerase LigD, polymerase domain pr            346      552 (    -)     132    0.371    291      -> 
pdx:Psed_0303 DNA polymerase LigD, polymerase domain pr            325      540 (    -)     129    0.375    283      -> 
pdx:Psed_4714 DNA primase small subunit                            323      512 (    -)     123    0.341    299      -> 
pdx:Psed_4989 DNA ligase D                              K01971     683      503 (    -)     121    0.272    703      -> 
pdx:Psed_0328 ATP dependent DNA ligase                  K01971     310      323 (    -)      79    0.322    311      -> 
pdx:Psed_3144 histidine kinase internal region          K01971     602      282 (    -)      70    0.279    552      -> 
pdx:Psed_6303 ATP-dependent DNA ligase                             118      249 (    -)      63    0.346    127      -> 
pdx:Psed_0956 DNA ligase (EC:6.5.1.1)                   K10747     513      185 (    -)      48    0.286    311      -> 
pdx:Psed_3685 protein of unknown function UPF0089                  866      173 (    -)      45    0.270    433      -> 
pdx:Psed_3009 histidine kinase                                    1850      163 (    -)      43    0.250    503      -> 
pdx:Psed_0715 GAF sensor signal transduction histidine             547      157 (    -)      42    0.284    349      -> 
pdx:Psed_5724 histidine kinase                                    1778      153 (    -)      41    0.254    615      -> 
pdx:Psed_0252 amino acid adenylation domain protein (EC           7912      152 (    -)      40    0.255    601      -> 
pdx:Psed_4806 hypothetical protein                                1245      150 (    -)      40    0.278    388      -> 
pdx:Psed_5542 transcriptional regulator, putative ATPas            999      148 (    -)      40    0.302    358      -> 
pdx:Psed_4603 DEAD/H associated domain protein          K03724    1590      133 (    -)      36    0.321    215      -> 
pdx:Psed_5917 Long-chain-fatty-acid--CoA ligase (EC:6.2 K12508     633      129 (    -)      35    0.328    125      -> 
pdx:Psed_5174 hypothetical protein                                 517      122 (    -)      34    0.323    186      -> 
pdx:Psed_2723 Magnesium chelatase (EC:6.6.1.1)          K03404     755      118 (    -)      33    0.303    396      -> 
pdx:Psed_1701 Methyltransferase type 11                            244      116 (    -)      32    0.311    122      -> 
pdx:Psed_0961 hypothetical protein                                 252      111 (    -)      31    0.309    139      -> 
pdx:Psed_5885 regulatory protein TetR                              198      109 (    -)      31    0.341    91       -> 
pdx:Psed_5942 Protein of unknown function DUF2064       K09931     223      109 (    -)      31    0.375    64       -> 
pdx:Psed_0450 hypothetical protein                                 802      108 (    -)      30    0.301    113      -> 
pdx:Psed_3837 DNA alkylation repair enzyme                         264      108 (    -)      30    0.341    85       -> 
pdx:Psed_6225 Uncharacterized conserved protein UCP0075            375      108 (    -)      30    0.342    111      -> 
pdx:Psed_1537 Amidase                                   K01426     444      107 (    -)      30    0.322    245      -> 
pdx:Psed_3608 NUDIX hydrolase                                      186      107 (    -)      30    0.314    172      -> 
pdx:Psed_3859 transcriptional regulator, LysR family               304      107 (    -)      30    0.309    181      -> 
pdx:Psed_0135 NAD-dependent epimerase/dehydratase                  218      106 (    -)      30    0.324    170      -> 
pdx:Psed_3893 Anthranilate synthase., Aminodeoxychorism K03342     704      106 (    -)      30    0.319    210      -> 
pdx:Psed_1634 putative phytochrome sensor protein                  509      105 (    -)      30    0.356    104      -> 
pdx:Psed_3138 protein of unknown function DUF742                   195      105 (    -)      30    0.321    140      -> 
pdx:Psed_5622 oxidoreductase molybdopterin binding prot            606      105 (    -)      30    0.329    149      -> 
pdx:Psed_6634 Protein of unknown function DUF2339, tran            718      105 (    -)      30    0.327    101      -> 
pdx:Psed_0296 Formyl-CoA transferase (EC:2.8.3.16)                 410      104 (    -)      30    0.309    139      -> 
pdx:Psed_5142 histidine kinase                                     492      104 (    -)      30    0.341    182      -> 
pdx:Psed_5213 hypothetical protein                                 549      104 (    -)      30    0.301    346      -> 
pdx:Psed_5481 Patatin                                              338      104 (    -)      30    0.301    186      -> 
pdx:Psed_3223 alpha/beta hydrolase fold-3 domain-contai            341      103 (    -)      29    0.366    101      -> 
pdx:Psed_4014 exodeoxyribonuclease V, gamma subunit (EC K03583    1124      103 (    -)      29    0.302    149      -> 
pdx:Psed_3973 ribonuclease II                                      474      102 (    -)      29    0.307    166      -> 
pdx:Psed_1109 peptidase S1 and S6 chymotrypsin/Hap      K08372     360      101 (    -)      29    0.311    151      -> 
pdx:Psed_2324 multi-sensor signal transduction histidin           1859      101 (    -)      29    0.333    105      -> 
pdx:Psed_2330 protein of unknown function DUF6 transmem            295      101 (    -)      29    0.304    112      -> 
pdx:Psed_3568 lipolytic protein G-D-S-L family                     431      100 (    -)      29    0.301    229      -> 
pdx:Psed_4507 adenylylsulfate reductase, thioredoxin de K00390     234      100 (    -)      29    0.365    74       -> 
pdx:Psed_5303 9-cis-epoxycarotenoid dioxygenase (EC:1.1 K11159     483      100 (    -)      29    0.339    109      -> 
pdx:Psed_6505 beta-lactamase domain protein                        265      100 (    -)      29    0.311    225      -> 

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