SSDB Paralog Search Result

KEGG ID :pdx:Psed_4718 (356 a.a.)
Definition:ATP dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01479 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pdx:Psed_4989 DNA ligase D                               K01971     683     425     103    0.326    344     
pdx:Psed_0328 ATP dependent DNA ligase                   K01971     310     424     102    0.343    332     
pdx:Psed_3144 histidine kinase                                      602     298      74    0.310    326     
pdx:Psed_0956 DNA ligase (EC:6.5.1.1)                    K01971     513     282      70    0.313    332     
pdx:Psed_5599 ATP-dependent helicase HrpB                K03579     810     119      33    0.250    164     
pdx:Psed_0348 DNA polymerase III subunits gamma and tau  K02343     829     108      30    0.257    179     
pdx:Psed_0231 peptidyl-dipeptidase Dcp (EC:3.4.15.5)     K01284     677     105      30    0.264    330     
pdx:Psed_0715 GAF sensor signal transduction histidine              547     105      30    0.275    276     
pdx:Psed_2548 GntR family transcriptional regulator      K05799     246     105      30    0.248    254     
pdx:Psed_2259 monosaccharide-transporting ATPase (EC:3.  K10440..   827     103      29    0.261    303     
pdx:Psed_3557 acyl-homoserine-lactone acylase (EC:3.5.1  K01434     778     103      29    0.259    201     
pdx:Psed_2324 multi-sensor signal transduction histidin            1859     102      29    0.279    215     
pdx:Psed_3872 RNA binding S1 domain-containing protein   K02945     487     102      29    0.233    219     
pdx:Psed_2768 metallophosphoesterase                                262     101      29    0.313    99      
pdx:Psed_3537 chorismate synthase (EC:4.2.3.5)           K01736     395     101      29    0.251    339     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]