SSDB Paralog Search Result

KEGG ID :pdx:Psed_4989 (683 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01479 (aal,ahp,ahr,asg,ble,bmet,bvt,cmn,cmo,ctes,dja,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,ngl,nvn,patr,pch,pmum,ppac,puf,rbc,rla,slv,tap,tcm,vir : calculation not yet completed)
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Search Result : 239 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pdx:Psed_3144 histidine kinase                                      602     735     173    0.387    367     
pdx:Psed_0328 ATP dependent DNA ligase                   K01971     310     649     154    0.397    312     
pdx:Psed_2901 DNA polymerase LigD, polymerase domain-co  K01971     346     585     139    0.356    278     
pdx:Psed_4714 DNA primase small subunit                  K01971     323     566     135    0.350    283     
pdx:Psed_3272 DNA polymerase LigD, polymerase domain-co  K01971     661     503     121    0.272    703     
pdx:Psed_0303 DNA polymerase LigD, polymerase domain-co             325     477     115    0.355    293     
pdx:Psed_4718 ATP dependent DNA ligase                   K01971     356     425     103    0.326    344     
pdx:Psed_0956 DNA ligase (EC:6.5.1.1)                    K01971     513     364      89    0.316    342     
pdx:Psed_4036 hypothetical protein                                 1506     159      42    0.261    664     
pdx:Psed_5606 hypothetical protein                                  990     155      41    0.254    595     
pdx:Psed_1641 hypothetical protein                                  910     143      38    0.280    357     
pdx:Psed_3009 histidine kinase                                     1850     141      38    0.248    415     
pdx:Psed_0262 formyl-CoA transferase (EC:2.8.3.16)                  404     136      37    0.258    295     
pdx:Psed_5587 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cycl  K02551     558     136      37    0.273    297     
pdx:Psed_0979 UvrD/REP helicase                                     730     134      36    0.251    354     
pdx:Psed_6668 leucyl-tRNA synthetase (EC:6.1.1.4)        K01869     956     132      36    0.237    490     
pdx:Psed_0035 TrwC relaxase                                        1465     131      36    0.254    562     
pdx:Psed_2611 ATPase AAA                                            743     131      36    0.299    311     
pdx:Psed_2360 xanthine dehydrogenase (EC:1.17.1.4)       K11177     728     129      35    0.266    241     
pdx:Psed_3524 carbamoyl-phosphate synthase large subuni  K01955    1099     129      35    0.251    410     
pdx:Psed_5134 PAS/PAC sensor-containing diguanylate cyc             925     129      35    0.259    440     
pdx:Psed_3367 response regulator receiver                           326     128      35    0.264    307     
pdx:Psed_4805 NAD-glutamate dehydrogenase                K15371    1619     128      35    0.251    458     
pdx:Psed_0252 amino acid adenylation protein (EC:5.1.1.            7912     126      35    0.233    652     
pdx:Psed_2681 sarcosine oxidase (EC:1.5.3.1)             K00301     387     125      34    0.267    329     
pdx:Psed_2930 class I and II aminotransferase            K00817     365     124      34    0.266    320     
pdx:Psed_3373 hypothetical protein                                  325     124      34    0.285    200     
pdx:Psed_3531 ankyrin                                               504     124      34    0.312    224     
pdx:Psed_3543 alanyl-tRNA synthetase                     K01872     887     124      34    0.268    466     
pdx:Psed_0553 ATP-dependent helicase HrpA                K03578    1413     123      34    0.261    364     
pdx:Psed_3739 NADPH:quinone reductase (EC:1.6.5.5)                  341     122      34    0.280    239     
pdx:Psed_4171 monosaccharide-transporting ATPase (EC:3.  K10441     544     122      34    0.262    416     
pdx:Psed_6164 phosphoenolpyruvate carboxylase (EC:4.1.1  K01595     928     122      34    0.255    400     
pdx:Psed_6591 molecular chaperone DnaK                              655     122      34    0.239    289     
pdx:Psed_0835 transglycosylase-like domain-containing p             717     121      33    0.249    342     
pdx:Psed_1128 hypothetical protein                                  320     121      33    0.324    148     
pdx:Psed_4809 cytochrome c oxidase caa3-type, assembly   K02351..   726     121      33    0.265    343     
pdx:Psed_0490 Fis family transcriptional regulator                  575     120      33    0.274    219     
pdx:Psed_1754 hypothetical protein                       K16149     524     120      33    0.261    418     
pdx:Psed_4315 LuxR family transcriptional regulator                 888     120      33    0.270    407     
pdx:Psed_4496 hypothetical protein                                  375     120      33    0.281    210     
pdx:Psed_6404 LuxR family transcriptional regulator                 890     120      33    0.282    351     
pdx:Psed_6582 hypothetical protein                                  842     120      33    0.242    356     
pdx:Psed_2458 5-oxoprolinase (EC:3.5.2.9)                K01473     683     119      33    0.273    289     
pdx:Psed_4016 exodeoxyribonuclease V subunit alpha (EC:  K03581     721     119      33    0.267    363     
pdx:Psed_0451 hypothetical protein                                  625     118      33    0.257    389     
pdx:Psed_4300 nitrate reductase subunit alpha (EC:1.7.9  K00370    1234     118      33    0.236    369     
pdx:Psed_4580 hypothetical protein                                  477     118      33    0.236    399     
pdx:Psed_5317 error-prone DNA polymerase (EC:2.7.7.7)    K14162    1142     118      33    0.240    334     
pdx:Psed_3614 hypothetical protein                                  728     117      33    0.254    366     
pdx:Psed_5855 GntR family transcriptional regulator      K00375     467     117      33    0.271    399     
pdx:Psed_6892 hypothetical protein                                  674     117      33    0.239    557     
pdx:Psed_0393 DNA topoisomerase I (EC:5.99.1.2)          K03168     952     116      32    0.244    250     
pdx:Psed_0882 peptidase S41                              K08676    1122     116      32    0.249    716     
pdx:Psed_1030 peptidase S1 and S6 chymotrypsin/Hap                  591     116      32    0.267    322     
pdx:Psed_1096 UvrD/REP helicase                                    1106     116      32    0.237    410     
pdx:Psed_3588 DNA polymerase I (EC:2.7.7.7)              K02335     939     116      32    0.342    158     
pdx:Psed_6436 transcriptional activator domain-containi             986     116      32    0.284    232     
pdx:Psed_1352 peptide ABC transporter ATPase (EC:3.6.3.  K02031..   616     115      32    0.261    348     
pdx:Psed_2903 TAP domain-containing protein                         539     115      32    0.274    252     
pdx:Psed_4722 hypothetical protein                                  346     115      32    0.285    288     
pdx:Psed_6078 integrase protein                                     827     115      32    0.251    505     
pdx:Psed_1573 biotin carboxylase (EC:6.3.4.14 6.4.1.3)             1873     114      32    0.238    445     
pdx:Psed_1943 Sterol 3-beta-glucosyltransferase (EC:2.4             418     114      32    0.267    337     
pdx:Psed_5005 transaldolase                                         399     114      32    0.238    362     
pdx:Psed_1999 winged helix family transcriptional regul            1107     113      32    0.247    385     
pdx:Psed_3630 SNF2-like protein                                    1053     113      32    0.265    283     
pdx:Psed_3685 hypothetical protein                                  866     113      32    0.275    466     
pdx:Psed_4144 osmosensitive K channel His kinase sensor  K07646     857     113      32    0.279    297     
pdx:Psed_5724 histidine kinase                                     1778     113      32    0.252    310     
pdx:Psed_5998 NAD-glutamate dehydrogenase                          1502     113      32    0.265    596     
pdx:Psed_6927 amidohydrolase 2                                      448     113      32    0.244    373     
pdx:Psed_0497 regulatory protein ArsR                               250     112      31    0.295    237     
pdx:Psed_1224 hypothetical protein                       K07043     262     112      31    0.275    218     
pdx:Psed_4756 signal recognition particle-docking prote  K03110     607     112      31    0.290    169     
pdx:Psed_5277 propionyl-CoA carboxylase (EC:6.4.1.3)                508     112      31    0.269    216     
pdx:Psed_5729 hypothetical protein                                  750     112      31    0.280    329     
pdx:Psed_0398 helicase/secretion DEAH-box helicase       K06877     783     111      31    0.274    303     
pdx:Psed_0787 peptidase S1 and S6 chymotrypsin/Hap       K08372     627     111      31    0.256    246     
pdx:Psed_1653 hypothetical protein                                  434     111      31    0.266    244     
pdx:Psed_3989 hypothetical protein                                  246     111      31    0.320    147     
pdx:Psed_4806 hypothetical protein                                 1245     111      31    0.277    470     
pdx:Psed_5472 LuxR family transcriptional regulator                1033     111      31    0.265    249     
pdx:Psed_5646 heat shock protein 90                                 997     111      31    0.265    475     
pdx:Psed_6218 carbon-monoxide dehydrogenase (EC:1.2.99.  K03520     788     111      31    0.273    121     
pdx:Psed_0290 methylated-DNA--protein-cysteine methyltr             245     110      31    0.267    240     
pdx:Psed_3297 respiratory-chain NADH dehydrogenase doma  K00335     626     110      31    0.268    190     
pdx:Psed_4690 DEAD/DEAH box helicase domain-containing              504     110      31    0.247    324     
pdx:Psed_5423 30S ribosomal protein S3                   K02982     271     110      31    0.260    246     
pdx:Psed_6597 Isoquinoline 1-oxidoreductase (EC:1.3.99.  K07303     753     110      31    0.262    405     
pdx:Psed_0072 hypothetical protein                                  234     109      31    0.296    196     
pdx:Psed_0545 Cna B domain-containing protein                      1071     109      31    0.269    260     
pdx:Psed_1987 ribonuclease, Rne/Rng family               K08300    1200     109      31    0.330    115     
pdx:Psed_3621 hypothetical protein                                  378     109      31    0.259    232     
pdx:Psed_6066 4-hydroxyphenylacetate 3-hydroxylase       K00483     531     109      31    0.219    421     
pdx:Psed_6299 LuxR family transcriptional regulator                 932     109      31    0.248    581     
pdx:Psed_0440 PAS/PAC sensor-containing diguanylate cyc             734     108      30    0.249    390     
pdx:Psed_3001 non-ribosomal peptide synthetase domain-c            2056     108      30    0.264    250     
pdx:Psed_3124 methylmalonyl-CoA mutase (EC:5.4.99.2)     K01847     640     108      30    0.241    565     
pdx:Psed_3363 o-succinylbenzoate--CoA ligase (EC:6.2.1.  K00666     542     108      30    0.268    332     
pdx:Psed_3821 hypothetical protein                                   88     108      30    0.365    74      
pdx:Psed_4045 cobalamin B12-binding domain-containing p             357     108      30    0.289    284     
pdx:Psed_4051 hypothetical protein                                  262     108      30    0.312    208     
pdx:Psed_5542 winged helix family transcriptional regul             999     108      30    0.280    397     
pdx:Psed_6420 glucose-6-phosphate 1-dehydrogenase (EC:1  K00036     462     108      30    0.241    439     
pdx:Psed_6486 hypothetical protein                                 1355     108      30    0.268    370     
pdx:Psed_0445 hypothetical protein                                  316     107      30    0.322    87      
pdx:Psed_1085 hypothetical protein                                  420     107      30    0.300    110     
pdx:Psed_1395 hydrolase CocE/NonD family protein         K06978     584     107      30    0.238    302     
pdx:Psed_1886 DegT/DnrJ/EryC1/StrS aminotransferase                 369     107      30    0.237    262     
pdx:Psed_3350 succinate-semialdehyde dehydrogenase (EC:  K00135     489     107      30    0.268    164     
pdx:Psed_3420 sporulation transcriptional regulator whi  K09762     327     107      30    0.323    189     
pdx:Psed_3942 exonuclease SbcC                           K03546    1107     107      30    0.262    428     
pdx:Psed_4257 LuxR family transcriptional regulator                 870     107      30    0.292    250     
pdx:Psed_4689 RIO-like kinase                            K07178     322     107      30    0.278    302     
pdx:Psed_5578 LuxR family transcriptional regulator                 932     107      30    0.307    254     
pdx:Psed_6551 nitric oxide dioxygenase (EC:1.14.12.17)              398     107      30    0.247    369     
pdx:Psed_0142 RecB family nuclease                                  585     106      30    0.268    317     
pdx:Psed_0450 hypothetical protein                                  802     106      30    0.256    305     
pdx:Psed_1307 hypothetical protein                                  226     106      30    0.309    123     
pdx:Psed_1321 hypothetical protein                                  271     106      30    0.282    241     
pdx:Psed_2324 multi-sensor signal transduction histidin            1859     106      30    0.257    148     
pdx:Psed_2961 carbon-monoxide dehydrogenase (EC:1.2.99.             800     106      30    0.304    161     
pdx:Psed_3084 transcriptional regulator CdaR                        569     106      30    0.322    115     
pdx:Psed_3250 integrase catalytic subunit                           553     106      30    0.260    350     
pdx:Psed_3893 anthranilate synthase (EC:4.1.3.27 4.1.3.  K03342     704     106      30    0.272    335     
pdx:Psed_5021 CHAD domain-containing protein                        506     106      30    0.238    453     
pdx:Psed_5677 family 2 glycosyl transferase                         504     106      30    0.272    360     
pdx:Psed_6503 oxidoreductase domain-containing protein              296     106      30    0.258    279     
pdx:Psed_0348 DNA polymerase III subunits gamma and tau  K02343     829     105      30    0.310    142     
pdx:Psed_0701 2,4-dichlorophenol 6-monooxygenase (EC:1.             518     105      30    0.337    86      
pdx:Psed_1448 fumarate reductase/succinate dehydrogenas  K07077     551     105      30    0.269    364     
pdx:Psed_1706 LuxR family transcriptional regulator                 940     105      30    0.261    376     
pdx:Psed_2009 competence protein ComEA                   K02237     261     105      30    0.299    147     
pdx:Psed_2740 linalool 8-monooxygenase (EC:1.14.99.28)   K00517     420     105      30    0.259    348     
pdx:Psed_2748 hypothetical protein                                  354     105      30    0.252    305     
pdx:Psed_2979 poly-beta-hydroxybutyrate polymerase doma  K03821     591     105      30    0.242    149     
pdx:Psed_3163 glycine dehydrogenase                      K00281     964     105      30    0.306    124     
pdx:Psed_3768 hypothetical protein                                  770     105      30    0.290    245     
pdx:Psed_4052 (S)-2-hydroxy-acid oxidase (EC:1.1.3.15)   K00101     392     105      30    0.266    312     
pdx:Psed_4053 hypothetical protein                                  595     105      30    0.256    293     
pdx:Psed_4088 peptide ABC transporter ATPase (EC:3.6.3.  K10823     368     105      30    0.261    306     
pdx:Psed_4710 hypothetical protein                                  163     105      30    0.312    109     
pdx:Psed_5199 hypothetical protein                                  368     105      30    0.304    171     
pdx:Psed_5732 transglycosylase-like domain-containing p             233     105      30    0.355    93      
pdx:Psed_6684 hypothetical protein                                  548     105      30    0.263    414     
pdx:Psed_0066 winged helix family transcriptional regul             935     104      30    0.258    693     
pdx:Psed_0236 acetoacetyl-CoA synthase (EC:6.2.1.16)     K01907     659     104      30    0.223    530     
pdx:Psed_0421 LysR family transcriptional regulator                 273     104      30    0.284    257     
pdx:Psed_0571 polysaccharide deacetylase                            899     104      30    0.250    252     
pdx:Psed_0718 LuxR family transcriptional regulator                 214     104      30    0.277    159     
pdx:Psed_0967 RmuC-domain-containing protein             K09760     520     104      30    0.278    151     
pdx:Psed_1004 peptide ABC transporter ATPase (EC:3.6.3.  K02031..   704     104      30    0.240    334     
pdx:Psed_1017 dihydropteroate synthase (EC:2.5.1.15)     K00796     297     104      30    0.260    150     
pdx:Psed_1088 nitrate reductase (EC:1.7.99.4)            K00372     686     104      30    0.240    546     
pdx:Psed_1455 glyoxalase/bleomycin resistance protein/d             419     104      30    0.314    175     
pdx:Psed_1728 aminoglycoside phosphotransferase          K16146     467     104      30    0.276    398     
pdx:Psed_1734 ABC transporter                            K02013     285     104      30    0.269    283     
pdx:Psed_1756 AraC family transcriptional regulator                 281     104      30    0.281    199     
pdx:Psed_1797 F420-dependent oxidoreductase                         309     104      30    0.247    279     
pdx:Psed_2061 long-chain-fatty-acid--CoA ligase (EC:6.2  K02182     528     104      30    0.281    235     
pdx:Psed_2292 LuxR family transcriptional regulator                 214     104      30    0.277    159     
pdx:Psed_3423 UvrABC system protein C                    K03703     742     104      30    0.303    178     
pdx:Psed_3673 Xylulokinase (EC:2.7.1.17)                            494     104      30    0.281    167     
pdx:Psed_4140 winged helix family transcriptional regul             992     104      30    0.265    268     
pdx:Psed_4566 2-oxoglutarate dehydrogenase E2            K00658     614     104      30    0.482    56      
pdx:Psed_4802 alpha amylase                              K01187     519     104      30    0.265    230     
pdx:Psed_5440 hypothetical protein                       K18481     383     104      30    0.368    125     
pdx:Psed_6579 NLP/P60 protein                                       347     104      30    0.291    189     
pdx:Psed_0608 hypothetical protein                                  484     103      29    0.240    404     
pdx:Psed_1045 phenazine biosynthesis protein PhzF famil  K06998     295     103      29    0.323    124     
pdx:Psed_1174 Queuosine biosynthesis protein             K07568     355     103      29    0.253    395     
pdx:Psed_1337 gentisate 1 2-dioxygenase-like protein                374     103      29    0.230    261     
pdx:Psed_1955 glutamate synthase (EC:1.4.7.1)            K00265    1522     103      29    0.248    315     
pdx:Psed_2238 F420-dependent oxidoreductase                         275     103      29    0.295    139     
pdx:Psed_3207 alpha-methylacyl-CoA racemase (EC:5.1.99.             396     103      29    0.260    407     
pdx:Psed_3534 peptidase M24                                         362     103      29    0.251    374     
pdx:Psed_3617 hypothetical protein                                  386     103      29    0.309    194     
pdx:Psed_5853 transposase IS111A/IS1328/IS1533                      410     103      29    0.233    330     
pdx:Psed_6178 hypothetical protein                                  202     103      29    0.263    156     
pdx:Psed_6386 hypothetical protein                                  959     103      29    0.275    520     
pdx:Psed_6446 alpha/beta hydrolase                                  283     103      29    0.285    158     
pdx:Psed_6636 nitric-oxide synthase (EC:1.14.13.39)      K00491     417     103      29    0.284    229     
pdx:Psed_0002 DNA polymerase III subunit beta (EC:2.7.7  K02338     376     102      29    0.279    233     
pdx:Psed_0182 family 2 glycosyl transferase                         345     102      29    0.254    358     
pdx:Psed_0925 GCN5-like N-acetyltransferase                         278     102      29    0.256    266     
pdx:Psed_1973 valyl-tRNA synthetase (EC:6.1.1.9)         K01873     874     102      29    0.244    266     
pdx:Psed_2085 malate dehydrogenase (EC:1.1.1.27)         K00024     430     102      29    0.266    256     
pdx:Psed_2593 fumarate reductase/succinate dehydrogenas             544     102      29    0.270    318     
pdx:Psed_3435 primosomal protein N'                      K04066     686     102      29    0.256    383     
pdx:Psed_3526 dihydroorotase, multifunctional complex t  K01465     433     102      29    0.269    171     
pdx:Psed_3556 5-oxoprolinase (EC:3.5.2.9)                K01474     659     102      29    0.243    181     
pdx:Psed_4014 exodeoxyribonuclease V subunit gamma (EC:  K03583    1124     102      29    0.239    339     
pdx:Psed_4515 xenobiotic-transporting ATPase (EC:3.6.3.            1596     102      29    0.258    450     
pdx:Psed_4757 chromosome segregation protein SMC         K03529    1186     102      29    0.246    346     
pdx:Psed_5172 acyltransferase                                       469     102      29    0.255    247     
pdx:Psed_5649 major facilitator superfamily protein                 662     102      29    0.234    290     
pdx:Psed_6039 transposase IS111A/IS1328/IS1533                      410     102      29    0.233    330     
pdx:Psed_6145 transcriptional activator domain-containi            1022     102      29    0.242    492     
pdx:Psed_6179 transposase IS111A/IS1328/IS1533                      410     102      29    0.233    330     
pdx:Psed_6602 von Willebrand factor A                               818     102      29    0.256    399     
pdx:Psed_6616 hypothetical protein                                  628     102      29    0.277    455     
pdx:Psed_6694 hypothetical protein                                  477     102      29    0.265    351     
pdx:Psed_0542 o-succinylbenzoate--CoA ligase (EC:6.2.1.  K15868     499     101      29    0.248    452     
pdx:Psed_1000 ABC transporter substrate-binding protein             634     101      29    0.249    337     
pdx:Psed_1730 alpha amylase                              K16147     656     101      29    0.267    146     
pdx:Psed_1763 molybdopterin dehydrogenase FAD-binding p             290     101      29    0.240    242     
pdx:Psed_2390 gas vesicle synthesis family protein                  278     101      29    0.230    235     
pdx:Psed_2783 phytoene desaturase                        K10027     532     101      29    0.250    364     
pdx:Psed_3058 hypothetical protein                                 1061     101      29    0.271    229     
pdx:Psed_3103 microsomal epoxide hydrolase (EC:3.3.2.9)             377     101      29    0.220    273     
pdx:Psed_3726 xylose isomerase domain-containing protei             303     101      29    0.264    330     
pdx:Psed_3749 Copper amine oxidase domain-containing pr  K00276     633     101      29    0.282    149     
pdx:Psed_3855 sulfate-transporting ATPase (EC:3.6.3.25)  K01990     967     101      29    0.270    226     
pdx:Psed_4651 beta-lactamase domain-containing protein   K12574     594     101      29    0.277    188     
pdx:Psed_4820 hypothetical protein                                  392     101      29    0.287    254     
pdx:Psed_4964 daunorubicin resistance ABC transporter A  K01990     323     101      29    0.219    338     
pdx:Psed_5109 hypothetical protein                                  288     101      29    0.311    151     
pdx:Psed_5273 dihydrolipoyl dehydrogenase (EC:1.8.1.4)   K00382     467     101      29    0.319    116     
pdx:Psed_6677 hypothetical protein                                  552     101      29    0.286    283     
pdx:Psed_6809 hypothetical protein                                  440     101      29    0.263    179     
pdx:Psed_0548 PAS/PAC sensor protein                               1401     100      29    0.246    679     
pdx:Psed_1449 acetolactate synthase (EC:2.2.1.6)         K01652     578     100      29    0.273    322     
pdx:Psed_1667 transcription termination factor Rho       K03628     793     100      29    0.297    128     
pdx:Psed_1828 monooxygenase FAD-binding protein                     435     100      29    0.262    343     
pdx:Psed_1868 histidine kinase                                      451     100      29    0.241    370     
pdx:Psed_1901 acylaminoacyl-peptidase                               643     100      29    0.263    433     
pdx:Psed_2507 LysR family transcriptional regulator                 306     100      29    0.277    260     
pdx:Psed_2519 phthalate 4,5-dioxygenase (EC:1.14.12.7)   K15060     418     100      29    0.241    282     
pdx:Psed_3692 peptide ABC transporter ATPase (EC:3.6.3.  K02032     380     100      29    0.254    213     
pdx:Psed_3757 carbon monoxide dehydrogenase subunit G               306     100      29    0.310    71      
pdx:Psed_4046 Ser/Thr phosphatase                                   619     100      29    0.293    307     
pdx:Psed_4411 FMN-dependent NADH-azoreductase            K01118     208     100      29    0.324    102     
pdx:Psed_4538 hypothetical protein                                  207     100      29    0.315    124     
pdx:Psed_4559 Nicotinate-nucleotide--dimethylbenzimidaz  K00768     351     100      29    0.263    339     
pdx:Psed_5152 diacylglycerol kinase catalytic subunit               309     100      29    0.286    262     
pdx:Psed_6451 hypothetical protein                                  420     100      29    0.260    242     
pdx:Psed_6893 hypothetical protein                                   82     100      29    0.364    88      
pdx:Psed_6896 helicase domain protein                              2082     100      29    0.285    151     

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