SSDB Paralog Search Result

KEGG ID :pgv:SL003B_3229 (550 a.a.)
Definition:ATP dependent DNA ligase family protein; K01971 DNA ligase (ATP)
Update status:T01458 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,pco,pes,pfp,psq,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 21 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pgv:SL003B_2931 phage portal protein, HK97 family                   379     124      34    0.278    284     
pgv:SL003B_0538 Two-component system sensor protein      K07649     458     120      33    0.238    261     
pgv:SL003B_3740 Phenylalanyl-tRNA synthetase beta subun  K01890     805     114      32    0.254    338     
pgv:SL003B_4283 NADH pyrophosphatase zinc ribbon domain  K03426     311     113      32    0.272    261     
pgv:SL003B_0119 benzoate-coenzyme A ligase                          497     111      31    0.248    258     
pgv:SL003B_3043 hypothetical protein                                411     111      31    0.267    296     
pgv:SL003B_3222 Sensor histidine kinase proline sensor             1174     110      31    0.259    212     
pgv:SL003B_3725 GTP-binding protein LepA                 K03596     601     109      31    0.257    210     
pgv:SL003B_2115 alpha/beta hydrolase                     K06889     572     107      30    0.292    219     
pgv:SL003B_2380 polyphosphate kinase                     K00937     743     107      30    0.272    243     
pgv:SL003B_1157 hypothetical protein                                691     106      30    0.243    530     
pgv:SL003B_1561 alanyl-tRNA synthetase                   K01872     887     106      30    0.252    238     
pgv:SL003B_3284 hypothetical protein                                323     106      30    0.258    213     
pgv:SL003B_1195 ATP synthase subunit beta/transription              364     105      30    0.279    308     
pgv:SL003B_4009 integrase catalytic subunit                         730     105      30    0.273    245     
pgv:SL003B_1871 L-aspartate dehydrogenase                K06989     269     103      29    0.324    142     
pgv:SL003B_2248 xanthine dehydrogenase small subunit     K13481     492     103      29    0.277    141     
pgv:SL003B_3833 3-isopropylmalate dehydratase large sub  K01703     438     103      29    0.295    224     
pgv:SL003B_2432 hypothetical protein                                400     101      29    0.268    272     
pgv:SL003B_3091 sulfatase                                           510     101      29    0.305    95      
pgv:SL003B_4199 P-loop hydrolase                         K07102     504     101      29    0.260    331     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]