SSDB Paralog Search Result

KEGG ID :phu:Phum_PHUM175060 (786 a.a.)
Definition:DNA ligase, putative (EC:6.5.1.1); K10747 DNA ligase 1
Update status:T01223 (abaa,abau,abk,abw,axs,babo,bamy,bhm,bmal,bsui,bthe,ced,cem,cen,cft,cfx,cgj,cgq,echp,echv,echw,ecla,eclc,efq,kln,kom,kph,kpk,kpq,kpz,law,lsj,mak,mavr,may,maz,mbz,mcat,ngi,ocu,paea,paee,paef,paeh,paej,paen,paeq,pbd,pcp,pda,pfn,pgm,pmul,pod,prh,pste,pstu,psw,sagc,seps,sgu,smia,smub,sthe,synd,synk,synr,xfl,xfs,zmc : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 17 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
phu:Phum_PHUM186980 DNA ligase, putative (EC:6.5.1.1)    K10776     927     616     146    0.275    530     
phu:Phum_PHUM592850 DNA ligase, putative (EC:6.5.1.1)    K10777     891     463     111    0.284    395     
phu:Phum_PHUM032510 hypothetical protein                           1017     149      40    0.308    159     
phu:Phum_PHUM347090 hypothetical protein                           2384     139      38    0.307    140     
phu:Phum_PHUM268990 ankyrin repeat-containing protein,             2512     121      33    0.301    123     
phu:Phum_PHUM233530 DNA repair and recombination protei  K10841    1206     120      33    0.306    144     
phu:Phum_PHUM294190 hypothetical protein                            629     117      33    0.312    93      
phu:Phum_PHUM473480 DNA damage-binding protein, putativ  K10140     527     115      32    0.308    107     
phu:Phum_PHUM140880 hypothetical protein                 K15363     718     114      32    0.311    103     
phu:Phum_PHUM207450 hypothetical protein                           2122     113      32    0.307    114     
phu:Phum_PHUM074970 retiin, putative                                891     111      31    0.305    131     
phu:Phum_PHUM128980 transcription elongation factor B p  K15076     639     109      31    0.311    119     
phu:Phum_PHUM244840 46 kDa FK506-binding nuclear protei  K14826     417     107      30    0.337    104     
phu:Phum_PHUM308440 hypothetical protein                           3463     107      30    0.300    130     
phu:Phum_PHUM433310 hypothetical protein                           2303     107      30    0.308    146     
phu:Phum_PHUM488470 woc protein, putative                          1606     102      29    0.302    106     
phu:Phum_PHUM253200 Splicing factor 3B subunit, putativ  K12829     728     101      29    0.301    73      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]