SSDB Paralog Search Result

KEGG ID :phu:Phum_PHUM186980 (927 a.a.)
Definition:DNA ligase, putative (EC:6.5.1.1); K10776 DNA ligase 3
Update status:T01223 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
phu:Phum_PHUM592850 DNA ligase, putative (EC:6.5.1.1)    K10777     891     622     148    0.244    800     
phu:Phum_PHUM175060 DNA ligase, putative (EC:6.5.1.1)    K10747     786     616     146    0.275    530     
phu:Phum_PHUM498090 polyA polymerase, putative (EC:2.4.  K10798     992     256      64    0.218    579     
phu:Phum_PHUM459240 DNA double-strand break repair Rad5             556     124      34    0.300    110     
phu:Phum_PHUM050610 peptidyl-prolyl cis-trans isomerase  K09566     760     120      33    0.310    126     
phu:Phum_PHUM294180 histone deacetylase 2C, putative                180     115      32    0.300    130     
phu:Phum_PHUM497550 hypothetical protein                 K17613    2138     114      32    0.311    119     
phu:Phum_PHUM499570 hypothetical protein                            713     111      31    0.329    79      
phu:Phum_PHUM500530 Nucleolar protein NOP5, putative     K14565     572     111      31    0.310    100     
phu:Phum_PHUM460950 Spectrin beta chain, putative                  1743     108      30    0.316    114     
phu:Phum_PHUM586250 hypothetical protein                            367     106      30    0.343    67      
phu:Phum_PHUM454160 hypothetical protein                 K12275     386     105      30    0.333    69      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]