SSDB Paralog Search Result

KEGG ID :ppu:PP_1105 (552 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00114 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ppu:PP_3260 ATP-dependent DNA ligase (EC:6.5.1.1)        K01971     833     185      48    0.242    277     
ppu:PP_2112 aconitate hydratase (EC:4.2.1.3)             K01681     913     122      34    0.281    199     
ppu:PP_4172 hypothetical protein                                    296     120      33    0.279    215     
ppu:PP_1563 phage terminase, large subunit                          561     119      33    0.256    203     
ppu:PP_1937 helicase                                               1062     110      31    0.248    165     
ppu:PP_1044 lipoprotein UxpA                                        550     107      30    0.239    351     
ppu:PP_1251 malate:quinone oxidoreductase (EC:1.1.5.4)   K00116     545     105      30    0.278    187     
ppu:PP_0767 LuxR family transcriptional regulator        K03556     905     104      30    0.300    160     
ppu:PP_1108 acylase                                      K07116     813     103      29    0.297    158     
ppu:PP_1467 sodium/hydrogen exchanger                               601     103      29    0.257    113     
ppu:PP_5310 ATP-dependent DNA helicase RecG              K03655     692     101      29    0.254    252     
ppu:PP_2925 malate:quinone oxidoreductase (EC:1.1.5.4)   K00116     539     100      29    0.315    73      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]