SSDB Paralog Search Result

KEGG ID :pti:PHATRDRAFT_49800 (426 a.a.)
Definition:histone deacetylase 1 isoform; K06067 histone deacetylase 1/2
Update status:T01075 (abal,acz,bacp,bacw,bchi,bmaf,bmai,bmaz,bpsp,bvg,camr,cbac,cbal,ccw,cea,cis,cll,clm,cln,clq,clr,cpel,cvo,egr,fgu,fpp,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,pbn,ppul,ppv,psim,pspu,rga,sage,sagg,sagn,smum,sphk,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
pti:PHATRDRAFT_51026 histone deacetylase 1 isoform       K06067     426    1676     388    0.552    429     
pti:PHATRDRAFT_45906 hypothetical protein                K11407     693     318      78    0.288    323     
pti:PHATRDRAFT_35869 hypothetical protein                K11407     534     301      74    0.252    341     
pti:PHATRDRAFT_9278 hypothetical protein                            294     294      73    0.266    312     
pti:PHATR_43919 hypothetical protein                                407     228      58    0.297    195     
pti:PHATRDRAFT_8891 hypothetical protein                            223     195      50    0.267    191     
pti:PHATR_4821 hypothetical protein                                 324     193      50    0.260    308     
pti:PHATRDRAFT_50482 hypothetical protein                          1188     170      45    0.260    296     
pti:PHATRDRAFT_4423 hypothetical protein                            284     108      30    0.383    47      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]