SSDB Paralog Search Result

KEGG ID :ptr:748850 (453 a.a.)
Definition:histone deacetylase 1; K06067 histone deacetylase 1/2
Update status:T01005 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 58 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ptr:104001070 histone deacetylase 1                      K06067     482    3053     702    0.998    453     
ptr:462950 histone deacetylase 2                         K06067     581    2707     623    0.868    453     
ptr:738624 histone deacetylase 3                         K11404     428    1724     399    0.589    404     
ptr:463280 histone deacetylase 9                         K11409    1066     399      97    0.270    404     
ptr:466968 histone deacetylase 7                         K11408     998     378      92    0.284    299     
ptr:460060 histone deacetylase 4                         K11406    1090     374      91    0.301    296     
ptr:454721 histone deacetylase 5                         K11406    1122     358      87    0.302    278     
ptr:100610515 histone deacetylase 6                      K11407    1205     319      79    0.269    294     
ptr:465712 histone deacetylase 8                         K11405     196     288      71    0.327    113     
ptr:458935 histone deacetylase 10                        K18671     649     287      71    0.264    220     
ptr:460190 histone deacetylase 11                        K11418     280     273      68    0.319    182     
ptr:743287 cylicin, basic protein of sperm head cytoske             648     149      40    0.320    97      
ptr:450137 microtubule-associated protein 1B             K10429    2468     141      38    0.385    96      
ptr:452792 apoptotic chromatin condensation inducer 1    K12875    1342     140      38    0.390    100     
ptr:457985 polymerase (RNA) III (DNA directed) polypept  K03024     195     136      37    0.301    136     
ptr:465001 PC4 and SFRS1 interacting protein 1                      530     134      36    0.340    106     
ptr:101058254 retrotransposon gag domain containing 4               569     129      35    0.324    108     
ptr:736438 cylicin, basic protein of sperm head cytoske             343     124      34    0.304    92      
ptr:453380 microtubule-associated protein 1A             K10429    2803     123      34    0.309    123     
ptr:465732 high mobility group nucleosome binding domai  K17045     280     123      34    0.312    109     
ptr:454449 proline, glutamate and leucine rich protein   K16913    1191     120      33    0.325    114     
ptr:744745 triadin                                                  722     120      33    0.344    93      
ptr:451195 smoothelin-like 1                                        487     119      33    0.317    104     
ptr:450498 cell division cycle and apoptosis regulator             1150     118      33    0.308    120     
ptr:471696 Treacher Collins-Franceschetti syndrome 1     K14562    1561     117      33    0.330    91      
ptr:455292 ralA binding protein 1                        K08773     655     114      32    0.307    101     
ptr:745157 nucleolar protein 56-like                                166     114      32    0.308    91      
ptr:462613 death-domain associated protein               K02308     742     113      32    0.300    120     
ptr:472952 transmembrane channel-like 1                             760     112      31    0.305    82      
ptr:744481 SEC62 homolog (S. cerevisiae)                 K12275     399     112      31    0.471    51      
ptr:745196 neurofilament, medium polypeptide             K04573     920     112      31    0.308    104     
ptr:456413 histidine rich calcium binding protein                   665     111      31    0.303    99      
ptr:739850 cyclic nucleotide gated channel alpha 1       K04948     690     111      31    0.387    62      
ptr:744733 retinoblastoma binding protein 6              K10624    1792     111      31    0.318    88      
ptr:466442 CTR9, Paf1/RNA polymerase II complex compone  K15176    1173     110      31    0.316    76      
ptr:450387 zinc finger E-box binding homeobox 1          K09299    1126     108      30    0.368    95      
ptr:465745 nucleosome assembly protein 1-like 3          K11281     506     108      30    0.304    79      
ptr:454455 misshapen-like kinase 1                       K04413    1303     107      30    0.343    70      
ptr:464596 coiled-coil domain containing 180                       1842     107      30    0.323    99      
ptr:470340 protein phosphatase, Mg2+/Mn2+ dependent, 1G  K17499     546     107      30    0.301    103     
ptr:740704 nucleophosmin (nucleolar phosphoprotein B23,  K11276     294     107      30    0.336    107     
ptr:100612063 ryanodine receptor 1 (skeletal)            K04961    5037     104      30    0.353    85      
ptr:450798 H6 family homeobox 3                          K09349     357     104      30    0.308    104     
ptr:453388 microfibrillar-associated protein 1           K13110     439     104      30    0.302    106     
ptr:463265 PHD finger protein 14                                    888     104      30    0.317    104     
ptr:470651 coiled-coil domain containing 108                       1940     104      30    0.355    62      
ptr:459718 peptidylprolyl isomerase G (cyclophilin G)    K09566     754     103      29    0.316    79      
ptr:738335 hepatoma-derived growth factor-related prote             671     103      29    0.337    86      
ptr:457611 calmodulin regulated spectrin-associated pro  K17493    1462     102      29    0.304    102     
ptr:461563 microtubule-associated protein 9              K10434     647     102      29    0.306    124     
ptr:465715 cysteine-rich hydrophobic domain 1                       205     102      29    0.387    62      
ptr:467269 N(alpha)-acetyltransferase 16, NatA auxiliar  K00670     864     102      29    0.340    50      
ptr:455959 lysine (K)-specific methyltransferase 2B      K14959    2496     101      29    0.329    70      
ptr:463534 family with sequence similarity 133, member              247     101      29    0.312    93      
ptr:465188 WD repeat domain 66                                     1155     101      29    0.322    87      
ptr:472825 metadherin                                               582     101      29    0.316    95      
ptr:463860 serrate, RNA effector molecule                           871     100      29    0.318    88      
ptr:473497 dynein heavy chain domain-containing protein            4189     100      29    0.383    60      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]