SSDB Paralog Search Result

KEGG ID :rbi:RB2501_00136 (561 a.a.)
Definition:periplasmic alpha-amylase; K01176 alpha-amylase
Update status:T00992 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rbi:RB2501_08605 alpha-amylase                                      589     331      81    0.258    527     
rbi:RB2501_12667 alpha-amylase                                      464     275      69    0.247    485     
rbi:RB2501_14859 trehalose synthase                      K05343    1106     220      56    0.225    409     
rbi:RB2501_07655 alpha amylase, catalytic region         K05341     648     200      51    0.249    341     
rbi:RB2501_08610 glycosidase                                        626     145      39    0.217    539     
rbi:RB2501_12672 alpha amylase, catalytic region         K16147     645     137      37    0.223    238     
rbi:RB2501_13489 hypothetical protein                              2988     135      37    0.225    467     
rbi:RB2501_11637 hypothetical protein                              1007     126      35    0.214    495     
rbi:RB2501_08740 hypothetical protein                               321     125      34    0.303    165     
rbi:RB2501_06345 proline aminopeptidase P II             K01262     437     114      32    0.216    245     
rbi:RB2501_00851 alpha-L-rhamnosidase                               834     105      30    0.264    182     
rbi:RB2501_07375 oxidoreductase                                     372     105      30    0.254    276     
rbi:RB2501_02050 thrombospondin type 3 repeat family pr            1153     101      29    0.237    427     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]