SSDB Paralog Search Result

KEGG ID :rcu:RCOM_0112460 (465 a.a.)
Definition:glutamate decarboxylase, putative (EC:4.1.1.15); K01580 glutamate decarboxylase
Update status:T01087 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_0112580 glutamate decarboxylase, putative (EC:  K01580     498    2807     646    0.876    467     
rcu:RCOM_0582120 glutamate decarboxylase, putative (EC:  K01580     529    2417     557    0.776    447     
rcu:RCOM_0776270 glutamate decarboxylase, putative (EC:  K01580     297    1628     377    0.934    256     
rcu:RCOM_0776380 glutamate decarboxylase, putative (EC:  K01580     180     777     183    0.676    176     
rcu:RCOM_1079290 sphingosine phosphate lyase, putative   K01634     541     329      81    0.245    363     
rcu:RCOM_1170790 group II plp decarboxylase, putative (  K01590     471     162      43    0.269    156     
rcu:RCOM_0320800 aromatic amino acid decarboxylase, put  K01593     316     120      33    0.276    214     
rcu:RCOM_1122530 aromatic amino acid decarboxylase, put  K01592     445     118      33    0.209    393     
rcu:RCOM_1452670 hypothetical protein                              1322     113      32    0.262    149     
rcu:RCOM_1105750 sec15, putative                                    789     107      30    0.231    234     
rcu:RCOM_1331090 beta-galactosidase, putative (EC:3.2.1             828     105      30    0.372    43      
rcu:RCOM_0599950 protein binding protein, putative       K17592    4704     104      30    0.266    188     
rcu:RCOM_1125770 GTP-binding protein, putative           K14537     559     104      30    0.262    214     
rcu:RCOM_0541470 aromatic amino acid decarboxylase, put  K01592     492     103      29    0.216    384     
rcu:RCOM_0104210 Glucan 1,3-beta-glucosidase 2 precurso             318     100      29    0.308    120     
rcu:RCOM_0574890 hypothetical protein                              1059     100      29    0.238    256     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]