SSDB Paralog Search Result

KEGG ID :rcu:RCOM_0112580 (498 a.a.)
Definition:glutamate decarboxylase, putative (EC:4.1.1.15); K01580 glutamate decarboxylase
Update status:T01087 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_0112460 glutamate decarboxylase, putative (EC:  K01580     465    2807     646    0.876    467     
rcu:RCOM_0582120 glutamate decarboxylase, putative (EC:  K01580     529    2581     594    0.781    483     
rcu:RCOM_0776270 glutamate decarboxylase, putative (EC:             297    1815     420    0.937    287     
rcu:RCOM_0776380 glutamate decarboxylase, putative (EC:             180     785     185    0.682    176     
rcu:RCOM_1079290 sphingosine phosphate lyase, putative   K01634     541     327      80    0.250    364     
rcu:RCOM_1170790 group II plp decarboxylase, putative (  K01590     471     171      45    0.246    268     
rcu:RCOM_1122530 aromatic amino acid decarboxylase, put  K01592     445     138      37    0.222    379     
rcu:RCOM_0320800 aromatic amino acid decarboxylase, put  K01593     316     124      34    0.266    214     
rcu:RCOM_0599950 protein binding protein, putative       K17592    4704     114      32    0.230    230     
rcu:RCOM_1452670 hypothetical protein                              1322     106      30    0.248    149     
rcu:RCOM_0065820 hypothetical protein                               187     105      30    0.250    172     
rcu:RCOM_1432610 transcription factor, putative          K15601     923     105      30    0.201    239     
rcu:RCOM_1331090 beta-galactosidase, putative (EC:3.2.1             828     104      30    0.372    43      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]