SSDB Paralog Search Result

KEGG ID :rcu:RCOM_0474620 (737 a.a.)
Definition:DNA ligase I, putative (EC:6.5.1.1); K10747 DNA ligase 1
Update status:T01087 (abal,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,camr,care,cbac,cbv,ccw,cea,cis,cll,clm,cln,clq,clr,cmx,cpel,cvo,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppul,ppv,pseo,psim,pspu,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 7 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_0466830 DNA ligase I, putative (EC:6.5.1.1)               1360    1491     346    0.356    688     
rcu:RCOM_0558150 DNA ligase I, putative (EC:6.5.1.1)     K10747     187     609     145    0.561    180     
rcu:RCOM_0440480 DNA ligase IV, putative (EC:6.5.1.1)    K10777     850     371      90    0.272    389     
rcu:RCOM_0053280 hypothetical protein                               841     255      64    0.272    360     
rcu:RCOM_0608310 hypothetical protein                               329     121      33    0.320    100     
rcu:RCOM_0839780 receptor protein kinase, putative                  459     100      29    0.320    75      
rcu:RCOM_0894660 DNA-repair protein xrcc1, putative      K10803     379     100      29    0.328    58      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]