SSDB Paralog Search Result

KEGG ID :rcu:RCOM_1509350 (468 a.a.)
Definition:histone deacetylase 1, 2, 3, putative; K06067 histone deacetylase 1/2
Update status:T01087 (blz,brp,bsul,bsut,bthr,bww,ero,fpu,hia,hir,kpb,llx,mde,mgj,mus,nmx,nte,ppud,psoj,pxb,sagt,tot,trm,vcy,vda,vtu,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_0575930 histone deacetylase 1, 2, 3, putative   K06067     455    1876     433    0.662    400     
rcu:RCOM_0792890 histone deacetylase 1, 2, 3, putative   K06067     429    1633     378    0.575    402     
rcu:RCOM_1469870 histone deacetylase hda1, putative      K11407     654     421     102    0.271    340     
rcu:RCOM_1282700 Histone deacetylase, putative                      382     401      97    0.285    298     
rcu:RCOM_1617710 histone deacetylase hda1, putative      K11407     599     380      92    0.279    315     
rcu:RCOM_1187430 Histone deacetylase, putative                      425     357      87    0.283    300     
rcu:RCOM_0797630 histone deacetylase, putative           K11418     342     296      73    0.278    317     
rcu:RCOM_0910720 hypothetical protein                               208     100      29    0.319    72      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]