SSDB Paralog Search Result

KEGG ID :rcu:RCOM_1617710 (599 a.a.)
Definition:histone deacetylase hda1, putative; K11407 histone deacetylase 6
Update status:T01087 (abal,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,care,cbac,cbv,ccw,cea,cln,clq,clr,cmx,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppv,pseo,psim,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_1469870 histone deacetylase hda1, putative      K11407     654     897     210    0.413    373     
rcu:RCOM_1187430 Histone deacetylase, putative                      425     607     144    0.343    362     
rcu:RCOM_1282700 Histone deacetylase, putative                      382     538     128    0.348    282     
rcu:RCOM_1509350 histone deacetylase 1, 2, 3, putative   K06067     468     380      92    0.279    315     
rcu:RCOM_0575930 histone deacetylase 1, 2, 3, putative   K06067     455     369      90    0.295    264     
rcu:RCOM_0792890 histone deacetylase 1, 2, 3, putative   K06067     429     357      87    0.272    313     
rcu:RCOM_1173290 phospholipid-transporting atpase, puta  K01530     715     111      31    0.377    53      
rcu:RCOM_1588020 acyl-CoA-binding protein, acbp, putati             343     109      31    0.328    67      
rcu:RCOM_1353430 zinc finger protein, putative           K10144     282     102      29    0.333    54      
rcu:RCOM_0017390 hypothetical protein                               393     100      29    0.400    40      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]