SSDB Paralog Search Result

KEGG ID :rcu:RCOM_1655340 (690 a.a.)
Definition:hypothetical protein; K01601 ribulose-bisphosphate carboxylase large chain
Update status:T01087 (aah,aal,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,bvt,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctes,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mcs,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,slv,ssuy,tap,tcm,tms,tpas,vir,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 17 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_ORF00051 ribulose-1,5-bisphosphate carboxylase  K01601     475    2463     567    0.811    475     
rcu:RCOM_1067650 hypothetical protein                    K01601     364    1779     411    0.680    435     
rcu:RCOM_ORF00052 acetyl-CoA carboxylase beta subunit    K01963     499    1691     391    0.786    351     
rcu:RCOM_0354800 carboxyl-tansferase, subunit of Het-AC  K01963     274    1178     274    0.729    269     
rcu:RCOM_1301440 Ribulose bisphosphate carboxylase larg  K01601     234     958     224    0.698    232     
rcu:RCOM_1653230 hypothetical protein                    K01601     245     796     187    0.764    161     
rcu:RCOM_0835790 DNA-directed RNA polymerase beta chain  K01601     163     428     103    0.703    101     
rcu:RCOM_1062790 hypothetical protein                    K01963     111     292      72    0.842    57      
rcu:RCOM_Mp11 ribosomal protein L10                                 150     113      32    0.352    54      
rcu:RCOM_0237720 actin binding protein, putative                    791     112      31    0.227    273     
rcu:RCOM_0242360 cytochrome P450, putative (EC:1.6.2.4)  K00327     694     110      31    0.209    172     
rcu:RCOM_1601590 brca1 interacting protein helicase 1 b  K15362    1248     109      31    0.247    271     
rcu:RCOM_0730440 hypothetical protein                               576     108      30    0.256    129     
rcu:RCOM_1674400 protein-tyrosine kinase, putative (EC:             496     108      30    0.202    430     
rcu:RCOM_0770570 gamma-soluble nsf attachment protein,              295     105      30    0.223    206     
rcu:RCOM_1528960 lipoxygenase, putative (EC:1.13.11.12)  K00454     902     103      29    0.222    167     
rcu:RCOM_1212020 hypothetical protein                               122     101      29    0.229    83      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]