SSDB Paralog Search Result

KEGG ID :rcu:RCOM_ORF00051 (475 a.a.)
Definition:ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain
Update status:T01087 (aal,ahp,ahr,asg,ble,bmet,bvt,cmn,cmo,ctes,dja,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,ngl,nvn,patr,pch,pmum,ppac,puf,rbc,rla,slv,tap,tcm,vir : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rcu:RCOM_1655340 hypothetical protein                    K01601     690    2463     567    0.811    475     
rcu:RCOM_1067650 hypothetical protein                    K01601     364    2061     476    0.716    475     
rcu:RCOM_1301440 Ribulose bisphosphate carboxylase larg  K01601     234    1559     361    0.996    232     
rcu:RCOM_1653230 hypothetical protein                    K01601     245     971     227    0.463    475     
rcu:RCOM_0835790 DNA-directed RNA polymerase beta chain  K01601     163     572     136    0.861    101     
rcu:RCOM_1292340 hypothetical protein                    K01601      84     493     118    0.901    81      
rcu:RCOM_0242360 cytochrome P450, putative (EC:1.6.2.4)  K00327     694     114      32    0.219    178     
rcu:RCOM_0536080 Protein MSP1, putative (EC:3.6.4.3)     K17681     626     110      31    0.216    296     
rcu:RCOM_1054110 gibberellin 3-beta hydroxylase, putati  K04124     356     110      31    0.221    172     
rcu:RCOM_0746010 kinase, putative (EC:2.7.10.2)                     813     105      30    0.266    158     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]