SSDB Paralog Search Result

KEGG ID :rge:RGE_26430 (851 a.a.)
Definition:ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T01803 (aso,ass,badl,baft,bcor,bdh,bdo,bgs,bmyc,bpv,btx,caj,caq,cii,cjc,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sht,sxy : calculation not yet completed)
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Search Result : 142 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rge:RGE_11090 ATP dependent DNA ligase (EC:6.5.1.1)      K01971     567     273      68    0.266    459     
rge:RGE_32640 ATP dependent DNA ligase DnaL (EC:6.5.1.1  K01971     280     174      46    0.310    313     
rge:RGE_01210 hypothetical protein                                 1860     162      43    0.232    836     
rge:RGE_22280 hypothetical protein                       K09800    1371     162      43    0.273    447     
rge:RGE_32190 hypothetical protein                       K11891    1192     161      43    0.235    719     
rge:RGE_23030 putative nucleoside-triphosphatase                    670     158      42    0.245    649     
rge:RGE_05530 hypothetical protein                       K00316     636     148      40    0.252    461     
rge:RGE_36000 transketolase (EC:2.2.1.1)                 K00615     667     143      38    0.255    447     
rge:RGE_02010 putative serine/threonine protein kinase              635     140      38    0.251    359     
rge:RGE_10640 dehydrogenase (FAD/FMN-containing) and Fe            1312     140      38    0.247    566     
rge:RGE_21170 hypothetical protein                                  545     140      38    0.284    250     
rge:RGE_11370 selenocysteine-specific elongation factor  K03833     645     139      38    0.246    407     
rge:RGE_23850 putative ABC transporter ATP-binding prot             535     137      37    0.269    432     
rge:RGE_36960 hypothetical protein                       K09800    1433     136      37    0.249    868     
rge:RGE_34690 putative competence protein ComA           K02238     801     134      36    0.251    761     
rge:RGE_44520 cobaltochelatase subunit CobN (EC:6.6.1.2  K02230    1259     132      36    0.269    446     
rge:RGE_22290 hypothetical protein                                  616     130      35    0.235    489     
rge:RGE_39760 DeoR family transcriptional regulator                 485     130      35    0.261    379     
rge:RGE_33340 lipoprotein NlpD                           K06194     314     129      35    0.312    138     
rge:RGE_14430 hypothetical protein                                  506     127      35    0.272    327     
rge:RGE_20130 putative periplasmic sensor hybrid histid             895     127      35    0.241    740     
rge:RGE_04040 TPR repeat protein                                    921     126      35    0.241    522     
rge:RGE_11070 putative N-acetyltransferase               K09181     893     125      34    0.250    571     
rge:RGE_01120 molecular chaperone, Hsp70 class           K04046     431     124      34    0.288    198     
rge:RGE_17880 hypothetical protein                                 1232     124      34    0.256    536     
rge:RGE_18190 putative M10A family peptidase                        633     123      34    0.266    323     
rge:RGE_42070 PilL protein (EC:3.1.1.61)                 K06596..  2041     122      34    0.302    179     
rge:RGE_17430 diguanylate cyclase                        K13590     549     121      33    0.257    580     
rge:RGE_32960 putative U32 family peptidase              K08303     654     121      33    0.276    181     
rge:RGE_16990 hypothetical protein                                  905     120      33    0.254    598     
rge:RGE_36590 nitroreductase family protein                         188     119      33    0.333    96      
rge:RGE_14490 PAS/PAC sensor hybrid histidine kinase (E            1233     118      33    0.239    532     
rge:RGE_08390 putative general secretion pathway protei  K02450     531     116      32    0.247    300     
rge:RGE_26660 hypothetical protein                                 1639     116      32    0.235    527     
rge:RGE_29510 outer membrane efflux protein                         462     116      32    0.272    324     
rge:RGE_30290 hypothetical protein                       K11904     919     116      32    0.253    383     
rge:RGE_37560 hypothetical protein                                  877     116      32    0.281    228     
rge:RGE_39560 hypothetical protein                                  252     116      32    0.324    145     
rge:RGE_07160 nitric oxide reductase activation protein  K02448     609     115      32    0.262    366     
rge:RGE_10820 putative glycoside hydrolase                          823     115      32    0.222    275     
rge:RGE_22880 hypothetical protein                                  324     115      32    0.278    176     
rge:RGE_14740 DNA mismatch repair protein MutL           K03572     629     114      32    0.253    261     
rge:RGE_26670 hypothetical protein                                 1218     114      32    0.265    524     
rge:RGE_08800 DNA repair protein RecN                    K03631     552     113      32    0.292    202     
rge:RGE_20970 pyruvate flavodoxin/ferredoxin oxidoreduc  K03737    1665     113      32    0.272    191     
rge:RGE_29420 tetrapyrrole methylase family protein                 847     113      32    0.328    119     
rge:RGE_00260 putative M1 family peptidase               K01256     887     112      31    0.279    308     
rge:RGE_01590 multi-sensor hybrid histidine kinase (EC:             964     112      31    0.257    296     
rge:RGE_27650 putative ATP-dependent helicase            K03722     656     112      31    0.239    687     
rge:RGE_31790 sensor protein (EC:2.7.13.3)                          818     112      31    0.253    570     
rge:RGE_34650 hypothetical protein                                  305     112      31    0.269    286     
rge:RGE_01560 putative hydrolase                         K07019     322     111      31    0.266    252     
rge:RGE_31130 beta-ketoacyl synthase                               2739     111      31    0.286    185     
rge:RGE_37530 exodeoxyribonuclease V beta chain RecB (E  K03582    1210     111      31    0.239    710     
rge:RGE_25940 hypothetical protein                                 1001     110      31    0.248    411     
rge:RGE_28910 putative ABC transporter substrate bindin  K02016     327     110      31    0.255    286     
rge:RGE_34470 phosphogluconate dehydratase Edd (EC:4.2.  K01690     604     110      31    0.249    257     
rge:RGE_37700 glycosyltransferase                        K13688    2717     110      31    0.246    629     
rge:RGE_38180 outer membrane efflux protein                         508     110      31    0.247    393     
rge:RGE_23000 vitamin B12-dependent ribonucleoside-diph  K00525     826     109      31    0.238    412     
rge:RGE_25860 hypothetical protein                       K11902     348     109      31    0.239    289     
rge:RGE_33920 PAS/PAC sensor hybrid histidine kinase               1217     109      31    0.224    727     
rge:RGE_35380 serine/threonine protein kinase                       973     109      31    0.267    389     
rge:RGE_39420 PAS/PAC sensor hybrid histidine kinase (E            1101     109      31    0.248    452     
rge:RGE_41640 peptidase M61 family protein                          571     109      31    0.274    314     
rge:RGE_43790 diguanylate cyclase                                   599     109      31    0.250    480     
rge:RGE_16780 putative flagellar hook-length control pr  K02414     366     108      30    0.275    236     
rge:RGE_29740 secretion protein HlyD family protein                 380     108      30    0.234    312     
rge:RGE_36920 putative S9 family peptidase                          686     108      30    0.292    250     
rge:RGE_40920 ribonuclease E (EC:3.1.26.12)              K08300     967     108      30    0.227    490     
rge:RGE_04230 CapK related-protein                       K01912     462     107      30    0.264    208     
rge:RGE_24480 RNA-binding S1 domain-containing protein   K06959     781     107      30    0.243    675     
rge:RGE_30100 peptidase M23B family protein                         215     107      30    0.292    161     
rge:RGE_30890 hypothetical protein                                  315     107      30    0.256    309     
rge:RGE_37010 putative acetolactate synthase large subu  K01652     584     107      30    0.279    172     
rge:RGE_09970 phosphate acetyltransferase (EC:2.3.1.8)   K13788     686     106      30    0.260    507     
rge:RGE_10780 putative glycosyl hydrolase                           576     106      30    0.266    244     
rge:RGE_14350 hypothetical protein                                  287     106      30    0.353    85      
rge:RGE_24870 glycosyl transferase family protein                   371     106      30    0.262    168     
rge:RGE_27890 hypothetical protein                                  691     106      30    0.272    250     
rge:RGE_29980 hypothetical protein                                  306     106      30    0.245    151     
rge:RGE_31610 tRNA(Ile)-lysidine synthase TilS (EC:6.3.  K04075     428     106      30    0.264    421     
rge:RGE_02130 primosomal protein N' (EC:3.6.4.-)         K04066     674     105      30    0.255    321     
rge:RGE_02680 pullulanase (EC:3.2.1.41)                            1175     105      30    0.233    455     
rge:RGE_07370 sensor protein (EC:2.7.13.3)               K02484     434     105      30    0.252    381     
rge:RGE_07980 putative general secretion pathway protei  K02461     412     105      30    0.293    239     
rge:RGE_12100 hypothetical protein                                  233     105      30    0.234    188     
rge:RGE_13670 alpha/beta hydrolase                                  316     105      30    0.268    239     
rge:RGE_16180 putative oxidoreductase                    K15461     639     105      30    0.259    320     
rge:RGE_22550 hypothetical protein                                  848     105      30    0.253    320     
rge:RGE_24860 carbamoyltransferase                       K00612     610     105      30    0.254    339     
rge:RGE_32000 tetraacyldisaccharide 4'-kinase LpxK (EC:  K00912     339     105      30    0.298    171     
rge:RGE_35530 D-lactate dehydrogenase Dld (EC:1.1.1.28)  K03777     581     105      30    0.235    272     
rge:RGE_36710 methionyl-tRNA synthetase MetG (EC:6.1.1.  K01874     685     105      30    0.277    101     
rge:RGE_36770 putative adenylate cyclase                            487     105      30    0.267    423     
rge:RGE_42940 PAS/PAC sensor hybrid histidine kinase (E            1000     105      30    0.238    835     
rge:RGE_47010 prolyl oligopeptidase (EC:3.4.21.26)       K01322     739     105      30    0.245    428     
rge:RGE_10460 hypothetical protein                                  775     104      30    0.234    580     
rge:RGE_13780 hypothetical protein                                  341     104      30    0.242    356     
rge:RGE_19320 putative hydrolase                                    442     104      30    0.250    260     
rge:RGE_28830 histidine kinase (EC:2.7.13.3)             K13040     585     104      30    0.232    419     
rge:RGE_29030 PAS/PAC sensor hybrid histidine kinase (E             874     104      30    0.304    184     
rge:RGE_37600 putative ABC transporter permease FbpB     K02011     548     104      30    0.333    141     
rge:RGE_40500 integral membrane sensor signal transduct  K07675     465     104      30    0.228    267     
rge:RGE_01950 hypothetical protein                                  600     103      29    0.279    165     
rge:RGE_23290 putative MxaL-like protein                 K16259     308     103      29    0.288    160     
rge:RGE_30940 hypothetical protein                                  467     103      29    0.245    322     
rge:RGE_34100 recombination factor protein RarA          K07478     447     103      29    0.232    284     
rge:RGE_36510 argininosuccinate lyase ArgH (EC:4.3.2.1)  K01755     466     103      29    0.259    266     
rge:RGE_43370 thioredoxin domain protein, DsbA family (             189     103      29    0.277    173     
rge:RGE_45880 PAS/PAC sensor hybrid histidine kinase (E             986     103      29    0.244    246     
rge:RGE_04280 group 1 glycosyl transferase                          781     102      29    0.249    482     
rge:RGE_06060 cobalamin biosynthetic protein CobN (EC:6  K02230    1334     102      29    0.264    254     
rge:RGE_09760 putative oxidoreductase, aldo/keto reduct             305     102      29    0.283    237     
rge:RGE_12320 hypothetical protein                                  299     102      29    0.252    266     
rge:RGE_14570 tRNA dimethylallyltransferase MiaA (EC:2.  K00791     309     102      29    0.270    152     
rge:RGE_14580 Bcr/CflA family multidrug resistance tran  K07552     409     102      29    0.249    173     
rge:RGE_15990 peptidase S9C family protein                          669     102      29    0.252    310     
rge:RGE_16400 antirestriction protein ArdC                          301     102      29    0.279    183     
rge:RGE_23380 PAS/PAC sensor hybrid histidine kinase (E             881     102      29    0.253    487     
rge:RGE_31050 MiaB-like tRNA modifying enzyme YliG       K14441     462     102      29    0.300    170     
rge:RGE_37520 exodeoxyribonuclease V gamma chain RecC (  K03583    1111     102      29    0.277    321     
rge:RGE_46370 methyltransferase/methylesterase, CheR/Ch  K13924    1002     102      29    0.264    201     
rge:RGE_00940 putative uracil-DNA glycosylase superfami  K02334     489     101      29    0.259    228     
rge:RGE_05060 peptidase S66 family protein                          351     101      29    0.259    317     
rge:RGE_05770 hypothetical protein                                  323     101      29    0.319    141     
rge:RGE_12990 putative N-acetyltransferase                          281     101      29    0.258    244     
rge:RGE_17120 GTP-binding signal recognition particle S  K02404     519     101      29    0.278    223     
rge:RGE_22020 curved DNA-binding protein CbpA            K05516     327     101      29    0.270    204     
rge:RGE_28610 integral membrane sensor signal transduct             454     101      29    0.236    182     
rge:RGE_30480 TonB-dependent siderophore receptor        K02014     807     101      29    0.248    315     
rge:RGE_45030 prolyl endopeptidase (EC:3.4.21.26)        K01322     718     101      29    0.242    513     
rge:RGE_46400 hypothetical protein                                  283     101      29    0.267    135     
rge:RGE_05010 putative haloacid dehalogenase superfamil  K07024     274     100      29    0.301    143     
rge:RGE_18260 putative M17 family peptidase              K01255     463     100      29    0.262    390     
rge:RGE_22850 PAS/PAC sensor hybrid histidine kinase (E            1383     100      29    0.236    901     
rge:RGE_25240 xenobiotic compound monooxygenase, DszA f             442     100      29    0.259    294     
rge:RGE_34660 hypothetical protein                                  848     100      29    0.258    396     
rge:RGE_35080 3-deoxy-D-manno-octulosonic-acid transfer  K02527     438     100      29    0.253    391     
rge:RGE_35940 hydrogenase transcriptional regulator Hup             498     100      29    0.244    439     
rge:RGE_42340 two-component system response regulator P  K02667     480     100      29    0.281    249     
rge:RGE_44400 cobyric acid synthase CobQ (EC:6.3.5.10)   K02232     509     100      29    0.255    278     

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