SSDB Paralog Search Result

KEGG ID :rge:RGE_32640 (280 a.a.)
Definition:ATP dependent DNA ligase DnaL (EC:6.5.1.1); K10747 DNA ligase 1
Update status:T01803 (aay,aec,age,bang,bcat,bpsc,calh,cama,ccj,cfo,cmv,crg,dew,egu,emn,gah,hoe,hst,hsu,jcu,kin,kpf,lok,mcas,mhor,nco,ptt,ptx,pxy,samy,seds,shv,soc,spoi,ssan,thf : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 18 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rge:RGE_26430 ATP-dependent DNA ligase LigD (EC:6.5.1.1  K01971     851     174      46    0.310    313     
rge:RGE_11090 ATP dependent DNA ligase (EC:6.5.1.1)      K10747     567     113      32    0.305    239     
rge:RGE_25940 hypothetical protein                                 1001     112      31    0.321    156     
rge:RGE_17050 hypothetical protein                                  245     111      31    0.316    196     
rge:RGE_30490 putative transmembrane sensor FecR         K07165     327     107      30    0.302    265     
rge:RGE_37700 glycosyltransferase                        K13688    2717     107      30    0.316    117     
rge:RGE_34260 hypothetical protein                       K14160     266     106      30    0.303    277     
rge:RGE_36460 uroporphyrinogen-III synthase HemD (EC:4.  K01719     257     106      30    0.336    131     
rge:RGE_17430 diguanylate cyclase                        K13590     549     104      30    0.335    155     
rge:RGE_01940 AraC family transcriptional regulator                 283     103      29    0.328    128     
rge:RGE_25440 putative nitrogenase molybdenum-iron prot             466     103      29    0.315    232     
rge:RGE_32720 multidrug efflux transporter               K03585     368     102      29    0.303    165     
rge:RGE_37540 exodeoxyribonuclease V alpha chain RecD (  K03581     672     101      29    0.329    161     
rge:RGE_37690 OmpA/MotB family outer membrane protein               282     101      29    0.302    129     
rge:RGE_46450 hypothetical protein                                  585     101      29    0.352    88      
rge:RGE_05600 hypothetical protein                                  566     100      29    0.333    156     
rge:RGE_26490 hypothetical protein                       K07290     644     100      29    0.345    110     
rge:RGE_41890 phosphoribosyltransferase                             228     100      29    0.327    110     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]