SSDB Paralog Search Result

KEGG ID :rha:RHA1_ro11147 (323 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD
Update status:T00382 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rha:RHA1_ro11122 DNA ligase (EC:6.5.1.1)                 K01971     278    1240     288    0.695    266     
rha:RHA1_ro00015 DNA-ligase (ATP), C-terminal            K01971     296     787     185    0.444    293     
rha:RHA1_ro00237 DNA ligase (ATP), C-terminal            K01971     314     712     168    0.411    321     
rha:RHA1_ro05048 ATP-dependent DNA ligase (EC:6.5.1.1)   K01971     766     542     129    0.373    327     
rha:RHA1_ro08755 ATP-dependent DNA ligase                           113     353      86    0.639    83      
rha:RHA1_ro05107 ATP-dependent DNA ligase (EC:6.5.1.1)              347     347      85    0.297    316     
rha:RHA1_ro08498 ATP-dependent DNA ligase                           104     340      83    0.515    103     
rha:RHA1_ro01648 ATP-dependent DNA ligase (EC:6.5.1.1)   K10747     503     281      70    0.315    295     
rha:RHA1_ro00510 serine/threonine protein kinase                    266     155      41    0.636    33      
rha:RHA1_ro07159 primosome assembly protein PriA         K04066     672     102      29    0.306    98      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]