SSDB Paralog Search Result

KEGG ID :rme:Rmet_0460 (552 a.a.)
Definition:Pyridoxal-dependent decarboxylase (EC:4.1.1.-); K01580 glutamate decarboxylase
Update status:T00351 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 17 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rme:Rmet_1766 glutamate decarboxylase B, PLP-dependent   K01580     460     169      44    0.283    187     
rme:Rmet_3482 glycine dehydrogenase (EC:1.4.4.2)         K00281     974     122      34    0.205    400     
rme:Rmet_2680 serine hydroxymethyltransferase (EC:2.1.2  K00600     508     115      32    0.266    154     
rme:Rmet_3123 cell division protein FtsZ                 K03531     396     111      31    0.240    329     
rme:Rmet_2228 hypothetical protein                                  403     110      31    0.264    201     
rme:Rmet_6254 putative integrase                                    616     108      30    0.238    307     
rme:Rmet_6318 hypothetical protein                                  272     108      30    0.307    150     
rme:Rmet_6477 hypothetical protein                                  188     108      30    0.373    51      
rme:Rmet_3506 tRNA uridine 5-carboxymethylaminomethyl m  K03495     654     104      30    0.258    310     
rme:Rmet_3554 FAD-dependent pyridine nucleotide-disulfi  K00383     493     104      30    0.226    297     
rme:Rmet_1356 Poly(3-hydroxybutyrate) polymerase (EC:2.  K03821     696     102      29    0.224    219     
rme:Rmet_1025 cysteine desulfurase (EC:2.8.1.7)          K04487     406     101      29    0.223    148     
rme:Rmet_2944 queuine tRNA-ribosyltransferase (EC:2.4.2  K00773     376     101      29    0.262    168     
rme:Rmet_4411 CoA-binding domain protein (EC:6.2.1.-)               712     101      29    0.250    204     
rme:Rmet_5250 methyl-accepting chemotaxis protein, sens  K05874     677     101      29    0.243    403     
rme:Rmet_4069 acetyl-CoA carboxylase                               1126     100      29    0.249    209     
rme:Rmet_5693 hypothetical protein                                  212     100      29    0.329    70      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]