SSDB Paralog Search Result

KEGG ID :rno:84578 (428 a.a.)
Definition:histone deacetylase 3 (EC:3.5.1.98); K11404 histone deacetylase 3
Update status:T01003 (aoa,avu,bgy,bhu,boe,btho,jaz,myz,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 13 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
rno:297893 histone deacetylase 1 (EC:3.5.1.98)          K06067     482     1842 (    -)     426    0.593    425      -> 
rno:84577 histone deacetylase 2 (EC:3.5.1.98)           K06067     488     1833 (    -)     424    0.588    422      -> 
rno:84576 histone deacetylase 1-like (EC:3.5.1.98)      K06067     484     1793 (    -)     415    0.580    424      -> 
rno:363481 histone deacetylase 8 (EC:3.5.1.98)          K11405     377     1056 (    -)     247    0.439    342      -> 
rno:108353290 histone deacetylase 8-like                           174      433 (    -)     105    0.604    96       -> 
rno:108348065 histone deacetylase 6                               1152      339 (    -)      83    0.256    309      -> 
rno:84581 histone deacetylase 6                         K11407    1152      339 (    -)      83    0.256    309      -> 
rno:84580 histone deacetylase 5 (EC:3.5.1.98)           K11406    1113      335 (    -)      82    0.265    430      -> 
rno:363287 histone deacetylase 4 (EC:3.5.1.98)          K11406    1077      331 (    -)      81    0.274    332      -> 
rno:687001 histone deacetylase 9 (EC:3.5.1.98)          K11409    1068      320 (    -)      79    0.248    428      -> 
rno:84582 histone deacetylase 7                         K11408    1040      314 (    -)      77    0.269    312      -> 
rno:362981 histone deacetylase 10 (EC:3.5.1.98)         K18671     588      296 (    -)      73    0.270    282      -> 
rno:297453 histone deacetylase 11 (EC:3.5.1.98)         K11418     347      252 (    -)      63    0.295    207      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]