SSDB Paralog Search Result

KEGG ID :rpa:RPA3650 (914 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00153 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 47 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rpa:RPA0802 ATP-dependent DNA ligase                     K01971     621     221      56    0.295    349     
rpa:RPA2866 pyruvate dehydrogenase subunit beta          K00162     469     140      38    0.263    152     
rpa:RPA3717 enoyl-CoA hydratase                          K07516     699     129      35    0.240    429     
rpa:RPA4347 hypothetical protein                                    144     128      35    0.314    121     
rpa:RPA2891 indole-3-glycerol phosphate synthase         K01609     287     127      35    0.258    213     
rpa:RPA1133 hypothetical protein                                    312     123      34    0.279    140     
rpa:RPA2553 hypothetical protein                         K06894    1737     121      33    0.210    889     
rpa:RPA3647 malto-oligosyltrehalose synthase             K06044     928     121      33    0.342    161     
rpa:RPA2129 energy transducer TonB C-terminal region     K03832     285     119      33    0.283    159     
rpa:RPA2456 bacterioferritin co-migratory protein        K03564     229     118      33    0.280    186     
rpa:RPA2902 molybdenum cofactor biosynthesis protein A   K03750     403     117      33    0.240    304     
rpa:RPA0249 transcription activator effector binding                260     116      32    0.254    142     
rpa:RPA2105 non-heme chloroperoxidase                    K00433     280     115      32    0.236    157     
rpa:RPA0287 leucyl-tRNA synthetase                       K01869     876     114      32    0.308    120     
rpa:RPA3124 DNA topoisomerase I                          K03168     911     114      32    0.283    99      
rpa:RPA1336 hypothetical protein                                   3296     112      31    0.240    312     
rpa:RPA1513 squalene/phytoene synthase                   K02291     355     112      31    0.233    210     
rpa:RPA1774 porin                                                   441     111      31    0.288    111     
rpa:RPA2472 hypothetical protein                                    366     111      31    0.273    183     
rpa:RPA3180 hypothetical protein                                    105     111      31    0.323    96      
rpa:RPA0279 DNA translocase FtsK                         K03466     822     110      31    0.218    335     
rpa:RPA3299 long-chain-fatty-acid CoA ligase             K01897     518     110      31    0.233    399     
rpa:RPA0535 ATP-dependent helicase HrpB                  K03579     825     108      30    0.219    351     
rpa:RPA1862 polysaccharide deacetylase                              357     108      30    0.250    188     
rpa:RPA2844 SCP-like extracellular protein                          223     107      30    0.337    83      
rpa:RPA0628 hypothetical protein                                    373     106      30    0.232    185     
rpa:RPA0035 phenylalanyl-tRNA synthetase subunit beta    K01890     803     105      30    0.225    285     
rpa:RPA2811 nucleoside triphosphate pyrophosphohydrolas  K04765     274     105      30    0.302    116     
rpa:RPA2864 branched-chain alpha-keto acid dehydrogenas  K00627     463     105      30    0.226    217     
rpa:RPA1544 magnesium chelatase subunit H                K03403    1248     104      30    0.232    401     
rpa:RPA1888 major capsid protein                                    417     104      30    0.209    349     
rpa:RPA2096 cobyric acid synthase                        K02232     524     104      30    0.264    174     
rpa:RPA2812 HlyC/CorC family transporter                 K03699     431     104      30    0.223    391     
rpa:RPA3211 TPR repeat-containing protein                          1134     103      29    0.228    364     
rpa:RPA0491 MgpS ATP-dependent helicase                  K17675    1093     102      29    0.261    134     
rpa:RPA2149 hydroxyquinol 1,2-dioxygenase                           330     102      29    0.232    224     
rpa:RPA4642 fructose-1,6-bisphosphate aldolase           K01624     361     102      29    0.226    133     
rpa:RPA3891 hypothetical protein                                   1242     101      29    0.245    204     
rpa:RPA4188 hypothetical protein                                    724     101      29    0.218    363     
rpa:RPA4456 hypothetical protein                                    179     101      29    0.273    77      
rpa:RPA1439 Fis family transcriptional regulator         K02584     542     100      29    0.206    504     
rpa:RPA3229 adenylate kinase                             K00939     371     100      29    0.356    90      
rpa:RPA3276 tonB protein                                 K03832     282     100      29    0.273    187     
rpa:RPA3485 racemase                                                397     100      29    0.228    377     
rpa:RPA3612 hypothetical protein                                    344     100      29    0.309    81      
rpa:RPA4266 Serine-type D-Ala-D-Ala carboxypeptidase     K01286     484     100      29    0.298    121     
rpa:RPA4546 hypothetical protein                         K07505     770     100      29    0.215    228     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]