SSDB Paralog Search Result

KEGG ID :rpd:RPD_0793 (630 a.a.)
Definition:ATP dependent DNA ligase; K10747 DNA ligase 1
Update status:T00345 (acts,aid,bmur,bsaf,bzg,cbae,cpep,cspu,cthm,dcr,dei,dit,ema,fsa,git,grs,hag,idt,kit,laca,lcy,lsv,lyb,malk,masz,mbas,mdv,mela,melm,miq,otk,our,paih,pamg,pavl,pbq,phr,phz,plab,plat,plx,pset,ptc,pvo,rbh,simp,smiz,smur,spho,stem,stro,syo,tak,thas,vam,xva : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 9 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
rpd:RPD_2161 ATP dependent DNA ligase                   K01971     313      227 (    -)      58    0.296    270      -> 
rpd:RPD_0516 pseudouridine synthase                     K06177     298      208 (    -)      53    0.485    66       -> 
rpd:RPD_3490 ATP dependent DNA ligase                   K01971     930      180 (    -)      47    0.285    340      -> 
rpd:RPD_3987 Excinuclease ABC subunit B                 K03702    1047      137 (    -)      37    0.350    100      -> 
rpd:RPD_0951 hypothetical protein                                  386      124 (    -)      34    0.489    47       -> 
rpd:RPD_1718 conserved hypothetical protein                        388      115 (    -)      32    0.346    104      -> 
rpd:RPD_2616 conserved hypothetical protein                        456      110 (    -)      31    0.321    106      -> 
rpd:RPD_4419 peptide methionine sulfoxide reductase     K07304     215      109 (    -)      31    0.311    90       -> 
rpd:RPD_2578 conserved hypothetical protein             K09991     267      108 (    -)      30    0.318    88       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]