SSDB Paralog Search Result

KEGG ID :rpd:RPD_3490 (930 a.a.)
Definition:ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00345 (ano,boe,cbut,cih,fis,hhb,iis,kfv,kle,lao,len,mdn,mmil,pdq,pku,prt,sbd,tdi,ttk : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rpd:RPD_2161 ATP dependent DNA ligase                    K01971     313     656     155    0.415    311     
rpd:RPD_0793 ATP dependent DNA ligase                    K10747     630     180      47    0.285    340     
rpd:RPD_3054 4-amino-4-deoxy-L-arabinose transferase an             644     141      38    0.312    125     
rpd:RPD_3992 conserved hypothetical protein                         124     131      36    0.347    118     
rpd:RPD_0436 leucyl-tRNA synthetase (EC:6.1.1.4)         K01869     878     128      35    0.311    122     
rpd:RPD_3033 DNA topoisomerase I (EC:5.99.1.2)           K03168     914     128      35    0.356    104     
rpd:RPD_0278 transcriptional regulator, CarD family      K07736     432     122      34    0.324    111     
rpd:RPD_4134 conserved hypothetical protein                         334     122      34    0.308    143     
rpd:RPD_1224 pyruvate phosphate dikinase (EC:2.7.9.1)    K01006    1027     109      31    0.324    108     
rpd:RPD_0643 conserved hypothetical protein                         172     104      30    0.322    118     
rpd:RPD_0331 conserved hypothetical protein                         169     101      29    0.317    123     
rpd:RPD_3163 Adenylate kinase (EC:2.7.4.3)               K00939     360     100      29    0.328    122     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]