SSDB Paralog Search Result

KEGG ID :rpi:Rpic_4143 (565 a.a.)
Definition:AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase
Update status:T00762 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,koy,kpa,kps,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,pmum,ppq,psq,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 28 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rpi:Rpic_3974 AMP-dependent synthetase and ligase        K01895     564    2632     606    0.682    563     
rpi:Rpic_4644 acetyl-CoA synthetase                      K01895     588     918     215    0.336    566     
rpi:Rpic_2099 acetyl-CoA synthetase                      K01895     660     720     170    0.309    563     
rpi:Rpic_3836 AMP-dependent synthetase and ligase        K08295     538     662     157    0.305    534     
rpi:Rpic_2037 propionyl-CoA synthetase                   K01908     633     604     144    0.301    554     
rpi:Rpic_0024 acyl-CoA synthetase                        K00666     544     578     138    0.287    529     
rpi:Rpic_0109 AMP-dependent synthetase and ligase        K01897     528     570     136    0.285    484     
rpi:Rpic_0727 long-chain-fatty-acid--CoA ligase          K00666     568     530     127    0.271    517     
rpi:Rpic_2412 acyl-CoA synthetase                                   567     517     124    0.294    520     
rpi:Rpic_3685 AMP-dependent synthetase and ligase        K01897     562     499     120    0.284    522     
rpi:Rpic_0413 AMP-dependent synthetase and ligase        K01897     579     497     119    0.269    516     
rpi:Rpic_0318 AMP-binding domain-containing protein      K00666     571     486     117    0.278    544     
rpi:Rpic_3980 long-chain-fatty-acid--CoA ligase          K01897     497     483     116    0.277    506     
rpi:Rpic_3104 long-chain-fatty-acid--CoA ligase          K01897     569     462     111    0.278    528     
rpi:Rpic_2630 AMP-dependent synthetase and ligase        K00666     558     440     106    0.262    535     
rpi:Rpic_2055 AMP-dependent synthetase and ligase        K16876     472     418     101    0.290    441     
rpi:Rpic_1455 long-chain-fatty-acid--CoA ligase          K00666     542     393      95    0.251    513     
rpi:Rpic_0655 acetoacetyl-CoA synthetase                 K01907     684     310      77    0.251    589     
rpi:Rpic_4765 AMP-dependent synthetase and ligase                   557     210      54    0.248    407     
rpi:Rpic_3117 phenylacetate-CoA ligase (EC:6.2.1.30)     K01912     434     154      41    0.233    360     
rpi:Rpic_0308 Beta-hydroxyacyl-(acyl-carrier-protein) d             565     125      34    0.238    357     
rpi:Rpic_2702 CDP-6-deoxy-delta-3,4-glucoseen reductase  K00523     349     114      32    0.276    105     
rpi:Rpic_2408 glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1  K01894     314     112      31    0.254    260     
rpi:Rpic_3501 Cache sensor-containing methyl-accepting   K03406     600     107      30    0.287    101     
rpi:Rpic_3983 dimethylmenaquinone methyltransferase                 232     107      30    0.234    171     
rpi:Rpic_4683 RND family efflux transporter MFP subunit  K15727     406     107      30    0.288    132     
rpi:Rpic_1312 hypothetical protein                                  406     106      30    0.286    199     
rpi:Rpic_1972 phenylalanyl-tRNA synthetase subunit beta  K01890     809     106      30    0.308    159     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]