SSDB Paralog Search Result

KEGG ID :rpt:Rpal_4171 (914 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00722 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
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Search Result : 14 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
rpt:Rpal_2316 DNA polymerase LigD, ligase domain protei K01971     313      654 (    -)     155    0.405    326      -> 
rpt:Rpal_0870 ATP dependent DNA ligase                  K10747     622      214 (    -)      55    0.290    341      -> 
rpt:Rpal_3590 putative histon H1                                   113      131 (    -)      36    0.359    92       -> 
rpt:Rpal_1324 hypothetical protein                                 311      128 (    -)      35    0.309    136      -> 
rpt:Rpal_3535 DNA topoisomerase I                       K03168     911      128 (    -)      35    0.302    106      -> 
rpt:Rpal_4831 conserved hypothetical protein                       144      128 (    -)      35    0.314    121      -> 
rpt:Rpal_1976 OmpA/MotB domain protein                             441      118 (    -)      33    0.330    109      -> 
rpt:Rpal_3646 adenylate kinase                          K00939     367      114 (    -)      32    0.330    112      -> 
rpt:Rpal_0492 helicase domain protein                   K17675    1093      112 (    -)      31    0.309    136      -> 
rpt:Rpal_0290 leucyl-tRNA synthetase                    K01869     876      110 (    -)      31    0.300    120      -> 
rpt:Rpal_1243 pyruvate, phosphate dikinase              K01006    1008      109 (    -)      31    0.355    107      -> 
rpt:Rpal_1853 putative histon H1                                    65      107 (    -)      30    0.484    64       -> 
rpt:Rpal_4665 oligoendopeptidase, pepF/M3 family        K08602     638      104 (    -)      30    0.388    85       -> 
rpt:Rpal_4745 Serine-type D-Ala-D-Ala carboxypeptidase  K01286     483      104 (    -)      30    0.336    107      -> 

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