SSDB Paralog Search Result

KEGG ID :rsh:Rsph17029_0848 (425 a.a.)
Definition:4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase
Update status:T00484 (acx,baco,bbag,bbx,bby,bgp,bpet,bue,cbaa,cbab,cbw,ceo,chz,cmq,csx,dmt,dmx,dmy,dmz,fne,fnt,fpi,fpj,fpm,fpx,fpz,hab,hcc,hcd,kpv,ksa,kvq,lat,lho,mcan,mcg,mcm,mki,mks,mpur,mpw,msr,msx,myv,pman,ppj,ppro,pses,ron,sbw,tbn,tig,txi,wcl,win,yal,yet,yew,yfr,yin,ykr,yro,yru : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 14 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rsh:Rsph17029_0718 acetylornithine transaminase protein  K00821     393     690     163    0.333    387     
rsh:Rsph17029_3480 hypothetical protein                  K00837     442     680     161    0.363    419     
rsh:Rsph17029_1957 class III aminotransferase                       436     667     158    0.327    437     
rsh:Rsph17029_2033 class III aminotransferase                       455     537     128    0.306    415     
rsh:Rsph17029_3177 hypothetical protein                             467     487     117    0.274    427     
rsh:Rsph17029_3993 aminotransferase                      K16871     460     478     115    0.304    414     
rsh:Rsph17029_2602 class III aminotransferase            K03851     459     466     112    0.275    403     
rsh:Rsph17029_0220 aminotransferase                      K01845     457     315      78    0.282    380     
rsh:Rsph17029_1947 urease accessory protein UreF         K03188     210     118      33    0.307    176     
rsh:Rsph17029_4073 2-dehydro-3-deoxyphosphooctonate ald  K01627     278     108      30    0.404    89      
rsh:Rsph17029_1319 iron-containing alcohol dehydrogenas             380     103      29    0.316    133     
rsh:Rsph17029_1710 flagellar hook-associated protein Fl  K02396    1363     100      29    0.371    89      
rsh:Rsph17029_3024 hypothetical protein                             203     100      29    0.306    121     
rsh:Rsph17029_3368 hypothetical protein                            1724     100      29    0.306    111     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]