SSDB Paralog Search Result

KEGG ID :rsk:RSKD131_0728 (533 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00844 (badl,baft,bcar,bcib,bdh,bdo,bgs,bok,bpv,bsz,caj,cjc,clh,coa,dok,eaa,eft,fpc,fpy,hro,kok,mbq,mjh,nle,oah,pmos,psx,rat,sbv,sfn,sht,tpk,umr,wct : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 45 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
rsk:RSKD131_0994 ATP dependent DNA ligase                K01971     877     274      68    0.280    364     
rsk:RSKD131_2344 hypothetical protein                               794     142      38    0.256    324     
rsk:RSKD131_3396 hypothetical protein                              1126     131      36    0.279    276     
rsk:RSKD131_2588 NAD-dependent epimerase/dehydratase                277     126      35    0.289    225     
rsk:RSKD131_2205 hypothetical protein                    K07007     392     122      34    0.279    394     
rsk:RSKD131_1135 cobaltochelatase subunit CobN           K02230    1078     119      33    0.264    212     
rsk:RSKD131_1627 branched-chain amino acid ABC transpor  K11960     642     118      33    0.278    309     
rsk:RSKD131_3044 hypothetical protein                               400     118      33    0.266    263     
rsk:RSKD131_0233 GntR family transcriptional regulator   K00375     472     117      33    0.283    247     
rsk:RSKD131_2513 group 1 glycosyl transferase                       413     117      33    0.280    189     
rsk:RSKD131_3665 Antifreeze protein, type I                         722     117      33    0.260    489     
rsk:RSKD131_0410 UDP-N-acetylmuramoylalanyl-D-glutamyl-  K01929     477     115      32    0.319    166     
rsk:RSKD131_1401 sensor protein                                     869     113      32    0.305    141     
rsk:RSKD131_3255 Fe3+-siderophore ABC transporter subst  K02016     297     113      32    0.309    188     
rsk:RSKD131_2160 glutamyl-tRNA synthetase                K01885     441     112      31    0.284    211     
rsk:RSKD131_2676 N-acylglucosamine 2-epimerase                      418     112      31    0.250    276     
rsk:RSKD131_0316 ATP-dependent helicase HrpB             K03579     808     111      31    0.253    316     
rsk:RSKD131_1356 chemotaxis histidine protein kinase, C  K03407    1095     111      31    0.267    344     
rsk:RSKD131_2391 hypothetical protein                    K07735     184     111      31    0.254    126     
rsk:RSKD131_2264 Type I secretion system ATPase          K06148     578     110      31    0.248    323     
rsk:RSKD131_0901 beta-lactamase domain-containing prote             347     109      31    0.271    207     
rsk:RSKD131_1744 hypothetical protein                               573     109      31    0.284    236     
rsk:RSKD131_2289 Inositol monophosphatase                K01092     258     109      31    0.258    256     
rsk:RSKD131_3247 L-sorbosone dehydrogenase                          429     109      31    0.275    182     
rsk:RSKD131_3774 ABC transporter permease                K02004     835     109      31    0.244    386     
rsk:RSKD131_0369 hypothetical protein                               411     108      30    0.259    263     
rsk:RSKD131_0334 short chain dehydrogenase                          259     107      30    0.256    254     
rsk:RSKD131_3880 GntR family transcriptional regulator   K00375     534     107      30    0.215    451     
rsk:RSKD131_2267 glycerophosphoryl diester phosphodiest             256     106      30    0.253    221     
rsk:RSKD131_3345 Dimethylmenaquinone methyltransferase   K10218     203     106      30    0.280    207     
rsk:RSKD131_4198 AMP-dependent synthetase and ligase                506     106      30    0.360    86      
rsk:RSKD131_0731 hypothetical protein                               316     105      30    0.225    306     
rsk:RSKD131_2249 Chromosome segregation protein SMC      K03529    1151     105      30    0.278    209     
rsk:RSKD131_3301 hypothetical protein                               787     104      30    0.248    318     
rsk:RSKD131_4304 AMP-dependent synthetase and ligase     K12508     560     104      30    0.289    304     
rsk:RSKD131_1015 peptide ABC transporter ATPase          K02031..   655     103      29    0.265    260     
rsk:RSKD131_4281 cobyric acid synthase                   K02232     484     102      29    0.234    337     
rsk:RSKD131_1223 Modification methylase, HemK family     K02493     278     101      29    0.283    184     
rsk:RSKD131_0231 Pyridoxal kinase                                   515     100      29    0.291    258     
rsk:RSKD131_0454 Deoxyribodipyrimidine photo-lyase type  K01669     471     100      29    0.240    258     
rsk:RSKD131_0614 ATP-dependent Clp protease ATP-binding  K03694     771     100      29    0.228    241     
rsk:RSKD131_1020 tRNA delta(2)-isopentenylpyrophosphate  K00791     328     100      29    0.295    132     
rsk:RSKD131_1513 Helix-turn-helix domain-containing pro  K07110     428     100      29    0.254    291     
rsk:RSKD131_1973 hydrolase, alpha/beta fold family       K01561     289     100      29    0.240    271     
rsk:RSKD131_2412 FAD linked oxidase domain-containing p  K11472     358     100      29    0.300    247     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]