SSDB Paralog Search Result

KEGG ID :scm:SCHCODRAFT_85278 (518 a.a.)
Definition:glycoside hydrolase family 13 protein; K01176 alpha-amylase
Update status:T01331 (aso,ass,baft,bcor,bmyc,btx,caj,caq,cii,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,mplu,ngg,oah,palk,rat,rbt,sbv,sht,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
scm:SCHCODRAFT_70398 glycoside hydrolase family 13 prot  K01176     529    1952     451    0.539    521     
scm:SCHCODRAFT_77509 glycoside hydrolase family 13 prot  K01176     483    1439     334    0.451    483     
scm:SCHCODRAFT_235431 glycoside hydrolase family 13 pro  K01176     490    1326     308    0.422    490     
scm:SCHCODRAFT_74312 glycoside hydrolase family 13 prot  K01176     536    1250     291    0.394    528     
scm:SCHCODRAFT_107514 glycoside hydrolase family 13 pro             470     333      82    0.245    485     
scm:SCHCODRAFT_67047 glycoside hydrolase family 13 prot             482     249      63    0.221    511     
scm:SCHCODRAFT_258385 glycoside hydrolase family 13 pro  K01187     584     218      56    0.239    268     
scm:SCHCODRAFT_257599 glycoside hydrolase family 13 and  K00749    2341     176      46    0.217    466     
scm:SCHCODRAFT_66163 glycoside hydrolase family 13 and   K00749    2350     173      45    0.254    189     
scm:SCHCODRAFT_108800 glycoside hydrolase family 13 pro  K01176     543     158      42    0.221    349     
scm:SCHCODRAFT_63517 glycoside hydrolase family 13 prot  K00700     681     146      39    0.276    170     
scm:SCHCODRAFT_114339 hypothetical protein                          692     108      30    0.278    79      
scm:SCHCODRAFT_76950 hypothetical protein                K06883     377     107      30    0.214    332     
scm:SCHCODRAFT_54219 hypothetical protein                           473     106      30    0.234    376     
scm:SCHCODRAFT_85456 hypothetical protein                           547     102      29    0.229    314     
scm:SCHCODRAFT_79797 glycoside hydrolase family 18 prot  K01183     438     100      29    0.198    429     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]