SSDB Paralog Search Result

KEGG ID :sco:SCO1202 (512 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00085 (abq,badl,baft,bcar,bced,bcib,bdh,bdo,bgs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,sbv,sepp,sfn,sht,sio,siq,stv,tpk,umr,vvl,wci,wct : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 272 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sco:SCO7345 ATP-dependent DNA ligase                     K01971     326     401      97    0.346    338     
sco:SCO6707 ATP-dependent DNA ligase (EC:6.5.1.1)        K01971     355     339      83    0.295    353     
sco:SCO6907 DNA ligase                                   K01971     257     224      57    0.301    269     
sco:SCO0316 DNA-binding protein                                     555     161      43    0.263    453     
sco:SCO0085 hypothetical protein                                    163     150      40    0.302    129     
sco:SCO1780 DNA repair protein                           K03631     572     149      40    0.279    426     
sco:SCO6597 beta-glucosidase                             K05349     859     149      40    0.255    487     
sco:SCO7327 two-component system sensory histidine kina            1331     144      39    0.277    358     
sco:SCO5065 transcriptional regulator                               943     142      38    0.248    536     
sco:SCO3285 large glycine/alanine rich protein                     1772     141      38    0.288    320     
sco:SCO2238 NAD(+) synthase (glutamine-hydrolysing)      K01950     613     140      38    0.276    312     
sco:SCO3150 hypothetical protein                                    458     140      38    0.270    371     
sco:SCO7666 zinc-binding oxidoreductase (fragment)                  315     140      38    0.280    325     
sco:SCO5678 regulatory protein                           K09684     552     137      37    0.266    305     
sco:SCO4501 3-ketoacyl-ACP reductase (EC:1.1.1.100)      K00059     430     134      36    0.253    419     
sco:SCO0132 transcriptional regulator                               919     132      36    0.263    316     
sco:SCO6111 oligopeptide ABC transporter ATP-binding pr  K02031..   585     132      36    0.280    396     
sco:SCO6188 transferase                                             566     131      36    0.269    238     
sco:SCO7320 hypothetical protein                                    580     131      36    0.263    338     
sco:SCO0670 glycerol-3-phosphate dehydrogenase           K00111     527     130      35    0.279    362     
sco:SCO0493 ABC-transporter transmembrane protein        K06148     601     129      35    0.263    308     
sco:SCO1391 phosphoenolpyruvate-protein phosphotransfer  K08483     556     129      35    0.259    340     
sco:SCO2101 carotenoid dehydrogenase                                506     128      35    0.273    319     
sco:SCO3319 glutamyl-tRNA reductase                      K02492     581     128      35    0.266    316     
sco:SCO4113 hydroxyglutarate oxidase                     K15736     426     128      35    0.256    332     
sco:SCO2975 hypothetical protein                                   1345     127      35    0.262    309     
sco:SCO6275 type I polyketide synthase                             4557     127      35    0.288    281     
sco:SCO5761 ATP-dependent DNA helicase                   K03724    1690     126      35    0.243    503     
sco:SCO1278 ATP/GTP-binding protein                                 525     125      34    0.266    274     
sco:SCO5973 phosphatase                                  K01090     842     125      34    0.290    255     
sco:SCO1948 zinc-binding carboxypeptidase                           999     124      34    0.282    188     
sco:SCO2000 ATP-binding RNA helicase                     K03579     998     124      34    0.274    369     
sco:SCO2032 hypothetical protein                                    404     124      34    0.298    218     
sco:SCO6822 integral membrane efflux protein                        521     124      34    0.288    250     
sco:SCO0263 oxidoreductase                                          371     123      34    0.263    281     
sco:SCO1090 phosphodiesterase                            K01126     227     123      34    0.267    217     
sco:SCO5278 magnesium chelatase                          K03404     655     123      34    0.297    397     
sco:SCO5404 two-component sensor kinase                             478     123      34    0.252    436     
sco:SCO3732 DEAD/DEAH box helicase                                  528     122      34    0.258    360     
sco:SCO4284 N-acetylglucosamine-6-phosphate deacetylase  K01443     381     122      34    0.245    278     
sco:SCO0432 peptidase                                              1245     121      33    0.263    342     
sco:SCO4315 homeostasis protein                          K06201     229     121      33    0.292    161     
sco:SCO4912 aldehyde dehydrogenase                                  293     121      33    0.256    246     
sco:SCO5024 oxidoreductase                                          290     121      33    0.286    227     
sco:SCO5694 1-deoxy-D-xylulose 5-phosphate reductoisome  K00099     418     121      33    0.293    229     
sco:SCP1.160c oxidoreductase                                        525     121      33    0.260    419     
sco:SCO4776 Ser/Thr protein kinase                                  979     120      33    0.294    228     
sco:SCO5064 hypothetical protein                                    800     120      33    0.254    406     
sco:SCO6619 dehydrogenase                                K07124     276     120      33    0.276    185     
sco:SCO7656 hypothetical protein                                    173     120      33    0.282    181     
sco:SCO0126 beta keto-acyl synthase                                2082     119      33    0.263    422     
sco:SCO1281 oxidoreductase                                          440     119      33    0.272    441     
sco:SCO4316 ATP/GTP binding protein                                 681     119      33    0.287    310     
sco:SCO7137 regulatory protein                                      924     119      33    0.267    330     
sco:SCO2763 ABC transporter ATP-binding protein          K06148    1243     118      33    0.283    233     
sco:SCO4263 transcriptional regulator                              1251     118      33    0.260    369     
sco:SCO4367 oxidoreductase                               K06911     951     118      33    0.256    266     
sco:SCO5815 ATP-dependent DNA helicase                   K03654     719     118      33    0.256    266     
sco:SCO0860 cation-transporting ATPase                   K01552     762     117      33    0.276    392     
sco:SCO5577 chromosome associated protein                K03529    1186     117      33    0.252    448     
sco:SCO6187 bifunctional synthase/transferase                       463     117      33    0.294    289     
sco:SCO7240 Ser/Thr protein kinase                                  745     117      33    0.273    406     
sco:SCO7623 NAD(P) transhydrogenase subunit alpha (EC:1  K00324     524     117      33    0.277    343     
sco:SCO0675 hypothetical protein                                    884     116      32    0.290    245     
sco:SCO4195 ATP/GTP binding protein                                 680     116      32    0.294    187     
sco:SCO4250 hypothetical protein                                   1111     116      32    0.264    401     
sco:SCO0544 hypothetical protein                                    510     115      32    0.277    412     
sco:SCO3104 hypothetical protein                                    679     115      32    0.287    442     
sco:SCO3555 hypothetical protein                         K12510     321     115      32    0.326    184     
sco:SCO7595 anhydro-N-acetylmuramic acid kinase          K09001     391     115      32    0.304    293     
sco:SCO2585 gamma-glutamyl phosphate reductase (EC:1.2.  K00147     428     114      32    0.238    320     
sco:SCO3231 CDA peptide synthetase II                              3670     114      32    0.252    393     
sco:SCO6408 Clp protease ATP binding subunit             K03696     842     114      32    0.244    537     
sco:SCO6998 cytochrome P450                                         407     114      32    0.273    253     
sco:SCO0370 DNA-binding protein                                    1134     113      32    0.261    310     
sco:SCO0627 ATP-utilizing protein                                   709     113      32    0.251    478     
sco:SCO0811 ABC transporter ATP-binding protein          K10562     505     113      32    0.297    192     
sco:SCO2121 two-component system sensor kinase                      413     113      32    0.304    230     
sco:SCO2958 bifunctional uroporphyrinogen-III synthetas  K01719     395     113      32    0.258    318     
sco:SCO3841 hypothetical protein                                    509     113      32    0.252    238     
sco:SCO5034 hypothetical protein                                    778     113      32    0.252    444     
sco:SCO5451 ABC transporter                              K06147     660     113      32    0.257    284     
sco:SCO6644 solute-binding lipoprotein                   K02035     503     113      32    0.261    322     
sco:SCO7512 AraC family transcription regulator                     318     113      32    0.273    176     
sco:SCO7683 non-ribosomal peptide synthase                         1842     113      32    0.278    327     
sco:SCO1292 hypothetical protein                                    907     112      31    0.264    397     
sco:SCO2974 Ser/Thr protein kinase                       K08884     543     112      31    0.271    251     
sco:SCO4368 lipase                                                  386     112      31    0.263    308     
sco:SCO5411 integrase/recombinase                                   468     112      31    0.275    240     
sco:SCO6496 dehydrogenase                                K00356     629     112      31    0.274    328     
sco:SCO7250 hypothetical protein                                    639     112      31    0.271    251     
sco:SCO0245 hypothetical protein                                    339     111      31    0.287    244     
sco:SCO1005 insertion element                                       405     111      31    0.233    347     
sco:SCO2733 hypothetical protein                                    279     111      31    0.271    155     
sco:SCO2759 transposase                                             405     111      31    0.233    347     
sco:SCO2767 ATP/GTP-binding protein                                 743     111      31    0.259    460     
sco:SCO4426 regulatory protein                                      993     111      31    0.255    509     
sco:SCO5585 PII uridylyl-transferase (EC:2.7.7.59)       K00990     835     111      31    0.321    168     
sco:SCO6040 lipoprotein                                             327     111      31    0.275    258     
sco:SCO6391 IS110 transposase/integrase                             405     111      31    0.233    347     
sco:SCO7413 short chain dehydrogenase                               343     111      31    0.295    173     
sco:SCO7677 solute-binding protein                       K02035     528     111      31    0.287    244     
sco:SCO7711 two component system sensor kinase                      509     111      31    0.245    376     
sco:SCO7782 IS110 transposase                                       405     111      31    0.233    347     
sco:SCO1182 hypothetical protein                                   1726     110      31    0.273    473     
sco:SCO2137 hypothetical protein                                    447     110      31    0.248    314     
sco:SCO2254 transmembrane efflux protein                 K08156     413     110      31    0.273    275     
sco:SCO3436 fatty acid CoA ligase                        K00666     517     110      31    0.338    133     
sco:SCO4508 cell division-like protein                   K03466    1525     110      31    0.234    435     
sco:SCO7599 transcriptional regulator                               311     110      31    0.247    295     
sco:SCO0158 oxidoreductase                                          409     109      31    0.278    313     
sco:SCO0484 monooxygenase                                           388     109      31    0.267    322     
sco:SCO1160 hypothetical protein                                    862     109      31    0.270    408     
sco:SCO1387 membrane associated protein                             301     109      31    0.248    238     
sco:SCO1413 hypothetical protein                                    472     109      31    0.250    356     
sco:SCO1570 argininosuccinate lyase (EC:4.3.2.1)         K01755     475     109      31    0.243    370     
sco:SCO3042 transcriptional regulator                               396     109      31    0.264    250     
sco:SCO3219 lipase                                                  391     109      31    0.273    326     
sco:SCO3318 porphobilinogen deaminase (EC:2.5.1.61)      K01749     319     109      31    0.269    309     
sco:SCO3348 DNA-binding protein                          K01524     309     109      31    0.309    152     
sco:SCO3408 hypothetical protein                         K07259     459     109      31    0.280    279     
sco:SCO3460 oxidoreductase                               K00520     505     109      31    0.270    392     
sco:SCO3543 DNA topoisomerase I                          K03168     952     109      31    0.286    231     
sco:SCO3607 hypothetical protein                                    489     109      31    0.268    269     
sco:SCO6062 ABC transporter ATP-binding protein          K05847     386     109      31    0.266    293     
sco:SCO6226 hypothetical protein                                    508     109      31    0.273    304     
sco:SCO6688 hypothetical protein                                   1171     109      31    0.274    197     
sco:SCO7522 DNA ligase                                   K01972     723     109      31    0.252    234     
sco:SCO7523 chaperone                                    K03696     837     109      31    0.252    325     
sco:SCO0293 beta-xylosidase                              K17641     796     108      30    0.266    428     
sco:SCO2884 cytochrome P450                                         408     108      30    0.278    288     
sco:SCO3230 CDA peptide synthetase I                               7463     108      30    0.230    487     
sco:SCO4879 hypothetical protein                                    443     108      30    0.262    302     
sco:SCO5852 tagatose-bisphosphate aldolase               K01624     282     108      30    0.262    252     
sco:SCO7415 racemase                                                385     108      30    0.265    302     
sco:SCP1.119 DNA polymerase III subunit beta (EC:2.7.7.  K02338     372     108      30    0.228    259     
sco:SCO0315 decarboxylase                                K01586     452     107      30    0.249    233     
sco:SCO0491 ABC transporter                              K02021     540     107      30    0.290    279     
sco:SCO0651 gas vesicle synthesis protein                           261     107      30    0.274    259     
sco:SCO1850 chelatase                                    K03404     672     107      30    0.262    328     
sco:SCP1.98 large alanine-rich protein                              723     107      30    0.245    425     
sco:SCO0171 nicotinate phosphoribosyltransferase (EC:2.  K00763     438     106      30    0.238    328     
sco:SCO0256 short chain oxidoreductase                   K03366     265     106      30    0.253    245     
sco:SCO3153 hypothetical protein                         K07056     286     106      30    0.266    259     
sco:SCO3630 hypothetical protein                                    301     106      30    0.242    297     
sco:SCO4115 hypothetical protein                                    707     106      30    0.275    510     
sco:SCO5819 sporulation transcription factor, WhiH                  295     106      30    0.278    194     
sco:SCO5832 citrate synthase                             K01647     390     106      30    0.262    279     
sco:SCO6806 phage integrase                                         405     106      30    0.241    369     
sco:SCO6974 GntR family transcriptional regulator        K03710     261     106      30    0.270    152     
sco:SCO7076 two-component histidine kinase               K07653     483     106      30    0.271    221     
sco:SCO7223 monooxygenase                                           373     106      30    0.274    190     
sco:SCO7511 glyceraldehyde 3-phosphate dehydrogenase     K00134     332     106      30    0.300    243     
sco:SCP1.143 hypothetical protein                                   369     106      30    0.254    276     
sco:SCO0127 beta keto-acyl synthase                                2240     105      30    0.266    357     
sco:SCO0407 transcriptional regulator                               334     105      30    0.282    255     
sco:SCO1671 hypothetical protein                                    772     105      30    0.291    148     
sco:SCO1724 Ser/Thr protein kinase                       K00924     550     105      30    0.293    123     
sco:SCO2356 hypothetical protein                                    467     105      30    0.270    293     
sco:SCO2952 helicase                                                744     105      30    0.280    193     
sco:SCO3181 molybdopterin biosynthesis protein           K03750     424     105      30    0.244    336     
sco:SCO3351 DNA repair protein RadA                      K04485     469     105      30    0.253    296     
sco:SCO3426 hypothetical protein                                    370     105      30    0.265    340     
sco:SCO3479 beta-galatosidase                            K01190     995     105      30    0.242    533     
sco:SCO3782 regulatory protein                                      449     105      30    0.261    375     
sco:SCO3947 ABC transporter                              K16014    1172     105      30    0.289    266     
sco:SCO4204 glycosyltransferase                          K15521     496     105      30    0.252    286     
sco:SCO4585 ABC transporter ATP-binding protein          K01990     327     105      30    0.259    344     
sco:SCO5710 large Pro/Ala/Gly-rich protein                         1366     105      30    0.270    318     
sco:SCO5996 hypothetical protein                                    937     105      30    0.310    229     
sco:SCO6273 type I polyketide synthase                             2152     105      30    0.274    521     
sco:SCO6431 peptide synthase                                       1171     105      30    0.237    215     
sco:SCO7597 hypothetical protein                                    332     105      30    0.273    304     
sco:SCO0492 peptide synthetase                                     3643     104      30    0.271    336     
sco:SCO2259 multidomain-containing protein family                  1334     104      30    0.290    290     
sco:SCO2403 hypothetical protein                                    323     104      30    0.283    159     
sco:SCO2834 hypothetical protein                                    383     104      30    0.276    370     
sco:SCO3093 hydrolase                                    K01524     313     104      30    0.273    289     
sco:SCO3127 phosphoenolpyruvate carboxylase              K01595     911     104      30    0.251    501     
sco:SCO3999 lipoprotein                                             376     104      30    0.299    234     
sco:SCO4736 phosphoglucosamine mutase                    K03431     452     104      30    0.293    259     
sco:SCO6334 transcriptional regulator                    K03556     892     104      30    0.239    527     
sco:SCO6827 polyketide synthase                                    2358     104      30    0.237    431     
sco:SCO7182 branched-chain amino acid ABC transporter A  K01996     237     104      30    0.311    148     
sco:SCO7641 dehydrogenase                                           398     104      30    0.258    376     
sco:SCO7655 oxidoreductase                                          310     104      30    0.280    186     
sco:SCO0305 hypothetical protein                                    959     103      29    0.256    399     
sco:SCO0618 hypothetical protein                                    461     103      29    0.267    415     
sco:SCO1748 expression regulator                                    398     103      29    0.276    156     
sco:SCO1778 transcriptional regulator                    K09684     548     103      29    0.289    180     
sco:SCO2499 transport ATPase                             K12955    1472     103      29    0.274    303     
sco:SCO2590 glycosyltransferase                                    1197     103      29    0.248    310     
sco:SCO3344 Ser/Thr protein kinase                                  720     103      29    0.247    259     
sco:SCO3556 secretory protein                            K02283     523     103      29    0.249    305     
sco:SCO3557 septum site determining protein                         396     103      29    0.235    366     
sco:SCO3869 WD-40 repeat-containing protein                        1676     103      29    0.266    259     
sco:SCO4144 hypothetical protein                                    388     103      29    0.264    337     
sco:SCO4196 organophosphate acid anhydrase                          404     103      29    0.284    215     
sco:SCO4377 serine-threonine protein kinase                         580     103      29    0.250    304     
sco:SCO5250 polyprenyl synthetase                        K13787     386     103      29    0.271    402     
sco:SCO5271 hypothetical protein                                   1096     103      29    0.249    551     
sco:SCO5353 diaminopimelate decarboxylase                K01586     463     103      29    0.232    366     
sco:SCO5506 regulatory protein                                     1091     103      29    0.279    165     
sco:SCO6344 amidase                                      K01426     535     103      29    0.258    349     
sco:SCO7318 hypothetical protein                                    752     103      29    0.246    439     
sco:SCO7689 ABC transporter ATP-binding protein          K06147     608     103      29    0.298    299     
sco:SCP1.201 hypothetical protein                                  1336     103      29    0.266    169     
sco:SCO0764 hydrolase                                               535     102      29    0.255    314     
sco:SCO1081 electron transfer flavoprotein subunit alph  K03522     320     102      29    0.246    211     
sco:SCO1184 hypothetical protein                                   1320     102      29    0.309    291     
sco:SCO1402 large hypothetical protein                              943     102      29    0.264    239     
sco:SCO1434 CbxX/CfqX family protein                                618     102      29    0.280    214     
sco:SCO1447 transcriptional regulator                               399     102      29    0.287    355     
sco:SCO1977 oxidoreductase                               K00266     496     102      29    0.280    214     
sco:SCO2110 Ser/Thr protein kinase                       K08884     667     102      29    0.238    365     
sco:SCO2179 leucyl aminopeptidase                        K01255     517     102      29    0.249    297     
sco:SCO2220 hypothetical protein                                    643     102      29    0.272    334     
sco:SCO3896 RNA nucleotidyltransferase                   K00970     483     102      29    0.271    354     
sco:SCO4092 ATP-dependent helicase                       K03578    1327     102      29    0.241    369     
sco:SCO4118 TetR family transcriptional regulator                   297     102      29    0.277    213     
sco:SCO5830 hypothetical protein                                    313     102      29    0.290    276     
sco:SCO6193 transcriptional regulator                               943     102      29    0.260    389     
sco:SCO6390 hypothetical protein                                    367     102      29    0.255    259     
sco:SCO6669 transcriptional regulator                               264     102      29    0.269    234     
sco:SCO7121 hypothetical protein                                    281     102      29    0.272    239     
sco:SCO7134 transcriptional regulator                               923     102      29    0.247    377     
sco:SCO7231 two-component system sensor kinase           K07654     503     102      29    0.294    187     
sco:SCO7324 regulatory protein                           K17763     299     102      29    0.301    196     
sco:SCO7326 hypothetical protein                                    824     102      29    0.275    265     
sco:SCP1.146 atp/GTP-binding protein                                848     102      29    0.252    325     
sco:SCO0111 oxidoreductase                                          250     101      29    0.274    190     
sco:SCO0164 cation-transporting ATPase                   K01552     776     101      29    0.254    339     
sco:SCO0361 hypothetical protein                                    390     101      29    0.253    304     
sco:SCO0571 hypothetical protein                                    442     101      29    0.257    338     
sco:SCO0580 dihydroxyacetone kinase                      K00863     593     101      29    0.257    346     
sco:SCO0712 transcriptional activator                               941     101      29    0.314    140     
sco:SCO1335 oxidoreductase                               K00034     246     101      29    0.257    214     
sco:SCO1587 transcriptional regulator                               480     101      29    0.260    308     
sco:SCO2324 ABC transporter ATP-binding protein          K16786..   563     101      29    0.229    297     
sco:SCO2475 LysR family transcriptional regulator                   309     101      29    0.250    252     
sco:SCO2750 hypothetical protein                                    287     101      29    0.305    174     
sco:SCO2815 TetR family transcriptional regulator                   232     101      29    0.295    217     
sco:SCO3580 transpeptidase                                          756     101      29    0.250    124     
sco:SCO3742 glycosyltransferase                                     242     101      29    0.314    159     
sco:SCO4116 AfsR-like regulatory protein                           1114     101      29    0.285    200     
sco:SCO4742 hypothetical protein                                    485     101      29    0.314    255     
sco:SCO5439 hypothetical protein                                    755     101      29    0.260    146     
sco:SCO5920 DEAD/DEAH box helicase                                  498     101      29    0.252    472     
sco:SCO6046 hypothetical protein                                    249     101      29    0.298    168     
sco:SCO7007 hypothetical protein                                    299     101      29    0.318    148     
sco:SCO7037 hypothetical protein                                   1131     101      29    0.249    217     
sco:SCO7241 oxidoreductase                                          540     101      29    0.291    251     
sco:SCO0344 GntR family transcriptional regulator                   414     100      29    0.234    290     
sco:SCO0488 hydrolase                                    K05989    1138     100      29    0.243    424     
sco:SCO0589 LysR family transcriptional regulator                   295     100      29    0.337    95      
sco:SCO0918 excinuclease ABC subunit A                   K03701     781     100      29    0.277    358     
sco:SCO0927 LysR family transcriptional regulator                   278     100      29    0.289    298     
sco:SCO1116 hypothetical protein                                    308     100      29    0.288    240     
sco:SCO1258 ABC transporter ATP-binding protein          K01990     306     100      29    0.259    294     
sco:SCO1744 two-component system sensor kinase                      388     100      29    0.265    223     
sco:SCO1799 hypothetical protein                                    259     100      29    0.408    71      
sco:SCO3756 two component system response regulator                 224     100      29    0.280    232     
sco:SCO4031 integral membrane transport protein                     859     100      29    0.306    183     
sco:SCO4331 hypothetical protein                                   1042     100      29    0.264    277     
sco:SCO4381 acetyl/propionyl CoA carboxylase subunit al  K01965     614     100      29    0.251    498     
sco:SCO4384 enoyl-CoA hydratase (EC:4.2.1.17)            K01692     247     100      29    0.350    143     
sco:SCO6274 type I polyketide synthase                             3576     100      29    0.247    376     
sco:SCO6698 3-carboxy-cis,cis-muconate cycloisomerase    K01857     454     100      29    0.262    389     
sco:SCO6840 hypothetical protein                                    681     100      29    0.234    273     
sco:SCO6964 hypothetical protein                                    216     100      29    0.282    220     
sco:SCO7006 oxidoreductase                                          416     100      29    0.289    263     
sco:SCO7031 beta-D-xylosidase                            K17641     797     100      29    0.271    129     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]