SSDB Paralog Search Result

KEGG ID :sco:SCO6907 (257 a.a.)
Definition:DNA ligase; K01971 DNA ligase (ATP)
Update status:T00085 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sco:SCO6707 ATP-dependent DNA ligase (EC:6.5.1.1)        K01971     355     364      89    0.333    234     
sco:SCO7345 ATP-dependent DNA ligase                     K01971     326     245      62    0.346    205     
sco:SCO1202 ATP-dependent DNA ligase (EC:6.5.1.1)        K01971     512     224      57    0.301    269     
sco:SCO0085 hypothetical protein                                    163     186      48    0.331    118     
sco:SCO4195 ATP/GTP binding protein                                 680     145      39    0.315    165     
sco:SCO3753 hypothetical protein                         K02004     850     121      33    0.308    221     
sco:SCO4307 N-acetylmuramic acid-6-phosphate etherase    K07106     311     108      30    0.325    120     
sco:SCO2299 bifunctional RNase H/acid phosphatase        K15634     497     106      30    0.304    102     
sco:SCO0407 transcriptional regulator                               334     104      30    0.302    192     
sco:SCO4804 hypothetical protein                                    815     104      30    0.305    167     
sco:SCO7638 phosphopyruvate hydratase                    K01689     434     104      30    0.309    136     
sco:SCO3282 precorrin-8X methylmutase (EC:5.4.1.2)       K06042     218     103      29    0.301    156     
sco:SCO5083 actinorhodin transporter                                578     103      29    0.308    172     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]