SSDB Paralog Search Result

KEGG ID :sct:SCAT_5457 (313 a.a.)
Definition:DNA polymerase LigD, ligase domain; K01971 DNA ligase (ATP)
Update status:T01646 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 21 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sct:SCAT_0666 DNA ligase                                 K01971     517     371      90    0.322    326     
sct:SCAT_5513 ATP-dependent DNA ligase                   K01971     359     336      82    0.329    319     
sct:SCAT_p1258 Regulatory protein afsR                              975     121      33    0.297    128     
sct:SCAT_1855 acetyl/propionyl-CoA carboxylase subunit   K11263     671     113      32    0.229    340     
sct:SCAT_0137 Beta-ketoacyl-acyl-carrier-protein syntha            4349     104      30    0.278    212     
sct:SCAT_0730 glycosyl hydrolase                         K01187     779     104      30    0.254    331     
sct:SCAT_p0246 lycopene cyclase                          K06443     404     104      30    0.268    149     
sct:SCAT_0449 type 11 methyltransferase                             211     103      29    0.295    166     
sct:SCAT_1595 dioxygenase                                K00459     355     103      29    0.259    239     
sct:SCAT_4284 asparagine synthetase                      K01953     628     103      29    0.289    121     
sct:SCAT_2851 hypothetical protein                                  465     102      29    0.288    271     
sct:SCAT_3943 hypothetical protein                       K06921     472     102      29    0.252    238     
sct:SCAT_p0958 hypothetical protein                                 906     102      29    0.257    292     
sct:SCAT_0136 6-methylsalicylic acid synthase                      6125     101      29    0.279    229     
sct:SCAT_0416 hypothetical protein                                14199     101      29    0.281    185     
sct:SCAT_4579 hypothetical protein                                  904     101      29    0.279    190     
sct:SCAT_p0562 4-fluorothreonine transaldolase           K00600     634     101      29    0.303    185     
sct:SCAT_p0855 transcriptional regulator                            311     101      29    0.265    268     
sct:SCAT_0053 hypothetical protein                                  262     100      29    0.286    189     
sct:SCAT_0398 Transcriptional regulator, ArsR family                265     100      29    0.285    144     
sct:SCAT_4397 thiamine monophosphate kinase              K00946     321     100      29    0.293    191     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]