SSDB Paralog Search Result

KEGG ID :sct:SCAT_5459 (298 a.a.)
Definition:conserved protein of unknown function; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01646 (abat,aoa,biu,bmay,bmec,boe,bpsl,bsem,bstg,bxi,cann,ccaj,ccan,cceu,cdip,cdk,cell,cfj,cfk,cman,csem,cser,cyi,eai,ecls,epz,fox,fvr,ghi,glz,keu,lvs,nai,ndv,nsd,nta,ocm,ome,opf,pazo,pcon,psco,pswu,pvr,rbb,rbp,rss,snw,strd,sulf,sure,synw,tci,tum,tvs,zju : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 14 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
sct:SCAT_5514 conserved protein of unknown function                335      524 (    -)     125    0.349    295      -> 
sct:SCAT_4712 protein of unknown function                          706      127 (    -)      35    0.333    129      -> 
sct:SCAT_2856 putative thymidylate kinase               K00943    1190      114 (    -)      32    0.306    183      -> 
sct:SCAT_5569 Carbamoyltransferase hypF2                K04656     780      112 (    -)      31    0.306    144      -> 
sct:SCAT_p0026 protein of unknown function                         304      111 (    -)      31    0.312    218      -> 
sct:SCAT_p0347 Sio5                                     K02004     853      110 (    -)      31    0.303    175      -> 
sct:SCAT_3399 protein of unknown function                          723      107 (    -)      30    0.307    225      -> 
sct:SCAT_p0031 Carbohydrate kinase                      K00852     305      104 (    -)      30    0.302    106      -> 
sct:SCAT_2801 conserved protein of unknown function                109      103 (    -)      29    0.370    92       -> 
sct:SCAT_3704 putative integral membrane protein                   444      102 (    -)      29    0.336    122      -> 
sct:SCAT_5785 protein of unknown function                          152      102 (    -)      29    0.316    98       -> 
sct:SCAT_5655 protein of unknown function                          961      101 (    -)      29    0.357    84       -> 
sct:SCAT_p1457 putative lipoprotein                     K02016     348      101 (    -)      29    0.319    135      -> 
sct:SCAT_2037 conserved protein of unknown function                138      100 (    -)      29    0.333    102      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]