SSDB Paralog Search Result

KEGG ID :sen:SACE_2706 (259 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD
Update status:T00492 (abal,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,care,cbac,cbv,ccw,cea,cln,clq,clr,cmx,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppul,ppv,pseo,psim,pspu,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 7 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sen:SACE_5682 DNA ligase, ATP-dependent                             333     449     108    0.387    253     
sen:SACE_1861 ATP-dependent DNA ligase (EC:6.5.1.1)                 370     287      71    0.312    272     
sen:SACE_2499 ATP-dependent DNA ligase (EC:6.5.1.1)                 211     273      68    0.411    129     
sen:SACE_0911 ATP-dependent DNA ligase (EC:6.5.1.1)      K10747     510     224      57    0.339    192     
sen:SACE_4546 hypothetical protein                                  247     105      30    0.325    77      
sen:SACE_7151 TenA/THI-4 family transcriptional regulat  K03707     220     102      29    0.360    100     
sen:SACE_3455 pyridine nucleotide-disulphide oxidoreduc  K00520     461     101      29    0.307    140     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]