SSDB Paralog Search Result

KEGG ID :sfa:Sfla_1982 (297 a.a.)
Definition:DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01647 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 6 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sfa:Sfla_0696 DNA polymerase LigD, polymerase domain-co             336     528     126    0.349    284     
sfa:Sfla_1173 N-acetyltransferase GCN5                              319     108      30    0.301    123     
sfa:Sfla_6000 anti-sigma-factor antagonist               K01425     450     107      30    0.343    134     
sfa:Sfla_0981 6-deoxyerythronolide-B synthase                      1805     106      30    0.309    94      
sfa:Sfla_2202 pyridoxal-5'-phosphate-dependent protein   K01733     374     105      30    0.316    155     
sfa:Sfla_3347 carbon monoxide dehydrogenase subunit G               314     103      29    0.370    54      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]