SSDB Paralog Search Result

KEGG ID :sfd:USDA257_c52060 (865 a.a.)
Definition:ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T02188 (abaa,abau,abk,abw,axs,babo,bamy,bhm,bmal,bsui,bthe,ced,cem,cen,cft,cfx,cgj,cgq,echp,echv,echw,ecla,eclc,efq,kln,kom,kph,kpk,kpq,kpz,law,lsj,mak,mavr,may,maz,mbz,mcat,ngi,ocu,paea,paee,paef,paeh,paej,paen,paeq,pbd,pcp,pda,pfn,pgm,pmul,pod,prh,pste,pstu,psw,sagc,seps,sgu,smia,smub,sthe,synd,synk,synr,xfl,xfs,zmc : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sfd:USDA257_c16580 ATP-dependent DNA ligase YkoU (EC:6.  K01971     850    2325     536    0.455    855     
sfd:USDA257_c15160 ATP-dependent DNA ligase YkoU (EC:6.  K01971     820    2178     502    0.426    857     
sfd:USDA257_c29030 DNA ligase-like protein               K01971     324     706     167    0.408    309     
sfd:USDA257_c28000 DNA ligase-like protein               K01971     291     611     145    0.403    278     
sfd:USDA257_c41770 DNA polymerase LigD ligase region (E  K01971     265     607     144    0.419    253     
sfd:USDA257_c30360 DNA ligase                            K01971     364     360      88    0.276    330     
sfd:USDA257_c53830 DNA ligase Lig (EC:6.5.1.1)           K01971     537     225      57    0.271    358     
sfd:USDA257_c28160 DNA polymerase LigD ligase region     K01971     190     170      45    0.328    134     
sfd:USDA257_c43300 hypothetical protein                             110     129      35    0.325    83      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]