SSDB Paralog Search Result

KEGG ID :shg:Sph21_2578 (905 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01450 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
shg:Sph21_1108 ATP dependent DNA ligase                  K01971     532     236      60    0.258    295     
shg:Sph21_3134 RNA binding S1 domain-containing protein  K02945     646     116      32    0.220    345     
shg:Sph21_0702 octanoyltransferase                       K03801     238     115      32    0.239    230     
shg:Sph21_4296 magnesium transporter                     K06213     438     114      32    0.241    245     
shg:Sph21_1080 hypothetical protein                                 362     112      31    0.242    198     
shg:Sph21_2092 OmpA/MotB domain-containing protein                  647     111      31    0.220    364     
shg:Sph21_0271 Relaxase/mobilization nuclease                       423     110      31    0.222    207     
shg:Sph21_1422 coagulation factor 5/8 type domain-conta             586     104      30    0.209    153     
shg:Sph21_2621 monosaccharide-transporting ATPase        K10441     501     104      30    0.215    497     
shg:Sph21_3168 hypothetical protein                                 291     104      30    0.247    178     
shg:Sph21_2114 magnesium chelatase                       K02230    1337     103      29    0.209    220     
shg:Sph21_0691 hypothetical protein                                 281     102      29    0.271    140     
shg:Sph21_1483 3-oxoacyl-ACP reductase                              296     102      29    0.227    220     
shg:Sph21_4315 N-sulfoglucosamine sulfohydrolase                    473     102      29    0.215    335     
shg:Sph21_0572 peptidase S8 and S53 subtilisin kexin se             539     101      29    0.256    172     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]