SSDB Paralog Search Result

KEGG ID :shn:Shewana3_0185 (394 a.a.)
Definition:elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Update status:T00428 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
shn:Shewana3_0197 elongation factor Tu (EC:3.6.5.3)      K02358     394    2604     599    1.000    394     
shn:Shewana3_0107 selenocysteine-specific translation e  K03833     673     371      90    0.328    256     
shn:Shewana3_0864 sulfate adenylyltransferase subunit 1  K00956     480     350      86    0.293    311     
shn:Shewana3_0301 GTP-binding protein TypA               K06207     603     328      81    0.291    323     
shn:Shewana3_3028 GTP-binding protein LepA               K03596     596     274      68    0.252    329     
shn:Shewana3_1030 translation initiation factor IF-2     K02519     889     260      65    0.324    247     
shn:Shewana3_3436 elongation factor G                    K02355     697     215      55    0.318    148     
shn:Shewana3_1037 peptide chain release factor 3 (EC:1.  K02837     526     198      51    0.289    159     
shn:Shewana3_0196 elongation factor G                    K02355     698     192      50    0.300    160     
shn:Shewana3_2395 ribosomal biogenesis GTPase            K14540     313     126      35    0.255    161     
shn:Shewana3_3025 GTP-binding protein Era                K03595     339     125      34    0.258    314     
shn:Shewana3_3451 hypothetical protein                   K09749     563     120      33    0.201    378     
shn:Shewana3_3732 Sec-independent protein translocase T  K03424     267     114      32    0.270    174     
shn:Shewana3_1571 metal dependent phosphohydrolase                  401     102      29    0.266    124     
shn:Shewana3_0782 putative nucleotide-binding protein    K09767     161     101      29    0.271    96      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]