SSDB Paralog Search Result

KEGG ID :shr:100927352 (484 a.a.)
Definition:histone deacetylase 2; K06067 histone deacetylase 1/2
Update status:T02286 (babr,banh,bcef,blx,blz,bmee,bmp,bpsh,brp,bsg,bsul,bsut,bsw,bthm,bthr,btv,but,bww,cbz,cdo,cjv,cmg,cmm,cun,cuq,cus,cuz,eclg,fpq,fpu,frf,hav,hia,hir,kpb,kpt,kpx,lia,lii,lio,llx,mavd,mde,mfc,mgj,mhom,mie,msb,msh,msn,mus,nmx,npn,nte,pcv,ppnm,ppud,pstt,pxb,sagt,smer,stax,syj,teu,tki,trm,vcq,vcy,vda,vtu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 28 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
shr:100913322 histone deacetylase 1-like                 K06067     408    2059     475    0.912    320     
shr:100914869 histone deacetylase 3                      K11404     428    1818     420    0.586    418     
shr:100913510 histone deacetylase 8-like                 K11405     379    1088     254    0.443    341     
shr:100922375 histone deacetylase 1                      K06067     133     600     143    0.676    136     
shr:100924421 histone deacetylase 7                      K11408     913     379      92    0.272    305     
shr:100930442 histone deacetylase 5                      K11406     991     379      92    0.294    293     
shr:100933076 histone deacetylase 9                      K11409    1076     370      90    0.259    367     
shr:100928468 histone deacetylase 10                     K18671     825     361      88    0.262    309     
shr:100930397 histone deacetylase 6                      K11407     905     357      87    0.250    336     
shr:100923523 histone deacetylase 4-like                 K11406    1086     333      82    0.329    173     
shr:100932592 histone deacetylase 11                     K11418     331     304      75    0.260    285     
shr:100914038 uncharacterized LOC100914038                          232     119      33    0.337    95      
shr:100925595 PRP40 pre-mRNA processing factor 40 homol  K12821     957     119      33    0.303    89      
shr:100921500 uncharacterized LOC100921500                         1221     117      33    0.343    67      
shr:100926928 nucleolin                                  K11294     668     114      32    0.321    109     
shr:100915390 microtubule-associated protein 1B          K10429    2347     113      32    0.302    149     
shr:100930992 smoothelin-like 1                                     567     112      31    0.320    97      
shr:100926444 polymerase (DNA directed), epsilon 3, acc  K02326     147     111      31    0.326    86      
shr:100915537 cell division cycle and apoptosis regulat            1149     109      31    0.312    80      
shr:100928935 craniofacial development protein 1                    302     109      31    0.343    102     
shr:100922999 PRP38 pre-mRNA processing factor 38 (yeas  K12850     899     108      30    0.316    79      
shr:100915291 RAB, member RAS oncogene family-like 6                796     107      30    0.333    66      
shr:100918187 eukaryotic translation initiation factor   K03252     885     107      30    0.320    97      
shr:100929861 DDRGK domain containing 1                             282     106      30    0.308    91      
shr:100928470 FYVE, RhoGEF and PH domain containing 6    K05724    1427     104      30    0.324    136     
shr:100925704 ubiquitin-conjugating enzyme E2Q family m  K10582     420     103      29    0.319    94      
shr:100933321 polymerase I and transcript release facto             387     103      29    0.304    92      
shr:100914103 nuclear receptor corepressor 2             K06065    3308     100      29    0.375    48      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]