SSDB Paralog Search Result

KEGG ID :shr:100927352 (484 a.a.)
Definition:histone deacetylase 2; K06067 histone deacetylase 1/2
Update status:T02286 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 155 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
shr:100913322 histone deacetylase 1-like                 K06067     408    2059     475    0.912    320     
shr:100914869 histone deacetylase 3                      K11404     428    1818     420    0.586    418     
shr:100913510 histone deacetylase 8-like                 K11405     379    1088     254    0.443    341     
shr:100922375 histone deacetylase 1                      K06067     133     600     143    0.676    136     
shr:100924421 histone deacetylase 7                      K11408     913     379      92    0.272    305     
shr:100930442 histone deacetylase 5                      K11406     991     379      92    0.294    293     
shr:100933076 histone deacetylase 9                      K11409    1076     370      90    0.259    367     
shr:100928468 histone deacetylase 10                     K11407     825     361      88    0.262    309     
shr:100930397 histone deacetylase 6                      K11407     905     357      87    0.250    336     
shr:100923523 histone deacetylase 4-like                 K11406    1086     333      82    0.329    173     
shr:100932592 histone deacetylase 11                     K11418     331     304      75    0.260    285     
shr:100931341 uncharacterized LOC100931341                          354     145      39    0.223    193     
shr:100925881 upstream binding transcription factor, RN  K09273     763     136      37    0.280    143     
shr:100918093 adaptor-related protein complex 3, delta   K12396    1143     134      36    0.253    178     
shr:100914944 kinesin family member 3A                   K10394     731     133      36    0.253    146     
shr:100928778 general transcription factor IIF, polypep  K03138     475     131      36    0.255    157     
shr:100931181 AT rich interactive domain 4A (RBP1-like)            1313     131      36    0.263    213     
shr:100926801 chromodomain helicase DNA binding protein  K11367    1834     130      35    0.294    102     
shr:100917269 zinc finger E-box binding homeobox 1       K09299    1278     128      35    0.279    104     
shr:100930208 adaptor-related protein complex 3, beta 2  K12397    1091     127      35    0.204    147     
shr:100927891 hepatoma-derived growth factor-related pr             203     125      34    0.297    175     
shr:100931099 proline-rich coiled-coil 2B                          2239     125      34    0.225    160     
shr:100931696 RNA polymerase II-associated factor 1 hom  K15174     529     125      34    0.258    155     
shr:100919518 leiomodin 1 (smooth muscle)                           580     124      34    0.217    143     
shr:100932508 leiomodin 3 (fetal)                                   571     123      34    0.272    103     
shr:100933439 apoptotic chromatin condensation inducer   K12875    1271     123      34    0.246    134     
shr:100926040 uncharacterized LOC100926040                         1589     120      33    0.269    160     
shr:100931179 Leo1, Paf1/RNA polymerase II complex comp  K15177     667     120      33    0.260    146     
shr:100914038 uncharacterized LOC100914038                          232     119      33    0.337    95      
shr:100925595 PRP40 pre-mRNA processing factor 40 homol  K12821     957     119      33    0.303    89      
shr:100934446 myeloid/lymphoid or mixed-lineage leukemi  K05702    1814     119      33    0.229    144     
shr:100914864 RNA binding motif protein 25               K12822     840     118      33    0.235    136     
shr:100918037 triadin                                               326     118      33    0.294    102     
shr:100921589 peptidylprolyl isomerase G (cyclophilin G  K09566     749     118      33    0.238    151     
shr:100935379 corepressor interacting with RBPJ, 1       K06066     476     118      33    0.228    145     
shr:100921500 uncharacterized LOC100921500                         1221     117      33    0.343    67      
shr:100921762 ring finger protein 20, E3 ubiquitin prot  K10696     981     117      33    0.273    132     
shr:100922627 CWC22 spliceosome-associated protein homo  K13100     876     117      33    0.229    266     
shr:100919210 dynein, axonemal, assembly factor 1                   576     115      32    0.298    131     
shr:100921599 eukaryotic translation initiation factor   K03243    1221     115      32    0.292    96      
shr:100923313 chromodomain helicase DNA binding protein  K14437    2999     115      32    0.218    147     
shr:100933639 acidic leucine-rich nuclear phosphoprotei             275     115      32    0.273    132     
shr:100919630 solute carrier family 24 (sodium/potassiu  K13749     546     114      32    0.290    100     
shr:100921842 general transcription factor IIIC, polype  K15199    2095     114      32    0.257    265     
shr:100924227 serrate RNA effector molecule homolog (Ar             656     114      32    0.286    98      
shr:100926928 nucleolin                                  K11294     668     114      32    0.321    109     
shr:100915390 microtubule-associated protein 1B          K10429    2347     113      32    0.302    149     
shr:100922166 uncharacterized LOC100922166                          743     113      32    0.284    102     
shr:100923354 MDN1, midasin homolog (yeast)              K14572    5610     113      32    0.236    144     
shr:100916477 TNF receptor-associated factor 3 interact             691     112      31    0.253    91      
shr:100921596 chromodomain helicase DNA binding protein  K14435    2043     112      31    0.237    152     
shr:100925999 uncharacterized LOC100925999                         1068     112      31    0.261    92      
shr:100930992 smoothelin-like 1                                     567     112      31    0.320    97      
shr:100915870 hepatoma-derived growth factor             K16641     216     111      31    0.249    201     
shr:100926444 polymerase (DNA directed), epsilon 3, acc  K02326     147     111      31    0.326    86      
shr:100933701 myelin transcription factor 1                        1169     111      31    0.265    162     
shr:100913498 cyclin-dependent kinase 11A                           220     110      31    0.282    78      
shr:100915855 RNA polymerase-associated protein RTF1 ho  K15178     713     110      31    0.290    107     
shr:100916125 nuclear casein kinase and cyclin-dependen             256     110      31    0.255    141     
shr:100917677 dynein heavy chain domain 1                          5018     110      31    0.269    93      
shr:100920812 par-3 partitioning defective 3 homolog B              990     110      31    0.246    191     
shr:100920906 synaptojanin 2                             K01099    1527     110      31    0.207    285     
shr:100933250 anoctamin 3                                          1534     110      31    0.241    116     
shr:100915537 cell division cycle and apoptosis regulat            1149     109      31    0.312    80      
shr:100920101 uncharacterized LOC100920101                          379     109      31    0.265    117     
shr:100924989 uncharacterized LOC100924989                         1363     109      31    0.221    149     
shr:100927976 THO complex 2                              K12879    1614     109      31    0.261    138     
shr:100928935 craniofacial development protein 1                    302     109      31    0.343    102     
shr:100935006 Rtf1, Paf1/RNA polymerase II complex comp  K15178     907     109      31    0.280    107     
shr:100920998 adenylate kinase domain containing 1                 1921     108      30    0.261    119     
shr:100921359 NOP2 nucleolar protein homolog (yeast)     K14835     706     108      30    0.261    157     
shr:100922999 PRP38 pre-mRNA processing factor 38 (yeas  K12850     899     108      30    0.316    79      
shr:100925168 KIAA1731 ortholog                                    2385     108      30    0.214    159     
shr:100929465 uncharacterized LOC100929465               K07966     596     108      30    0.238    147     
shr:100935211 uncharacterized LOC100935211                          593     108      30    0.264    121     
shr:100913218 DEK oncogene                               K17046     340     107      30    0.263    118     
shr:100915291 RAB, member RAS oncogene family-like 6                796     107      30    0.333    66      
shr:100918187 eukaryotic translation initiation factor   K03252     885     107      30    0.320    97      
shr:100918373 UPF3 regulator of nonsense transcripts ho  K14328     554     107      30    0.243    210     
shr:100921981 uncharacterized LOC100921981                          699     107      30    0.230    126     
shr:100924289 E3 ubiquitin-protein ligase RBBP6-like     K10624    1772     107      30    0.247    154     
shr:100926984 pescadillo ribosomal biogenesis factor 1   K14843     817     107      30    0.225    160     
shr:100927233 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54  K14808     757     107      30    0.223    197     
shr:100930746 ankyrin repeat domain 11                             2700     107      30    0.242    161     
shr:100931668 protein phosphatase, Mg2+/Mn2+ dependent,  K17499     554     107      30    0.246    114     
shr:100924093 nucleolin-like                             K11294     681     106      30    0.210    119     
shr:100928919 structure specific recognition protein 1   K09272     712     106      30    0.280    150     
shr:100929861 DDRGK domain containing 1                             282     106      30    0.308    91      
shr:100930226 zinc finger CCCH-type containing 18        K13092     954     106      30    0.293    92      
shr:100932524 uncharacterized LOC100932524                         1769     106      30    0.224    156     
shr:100934140 neurofilament, medium polypeptide          K04573     537     106      30    0.263    99      
shr:100913759 neurofilament, heavy polypeptide           K04574     797     105      30    0.274    113     
shr:100918654 zinc finger MYND domain-containing protei             350     105      30    0.250    140     
shr:100920572 axonemal dynein light chain domain contai            1082     105      30    0.212    160     
shr:100920752 SWI/SNF-related, matrix-associated actin-  K14439    1031     105      30    0.236    110     
shr:100926825 origin recognition complex, subunit 2      K02604     575     105      30    0.252    147     
shr:100930401 zinc finger CCCH-type containing 6                   1208     105      30    0.273    110     
shr:100932733 SAFB-like, transcription modulator                   1217     105      30    0.267    120     
shr:100913341 death-domain associated protein            K02308     737     104      30    0.286    119     
shr:100918711 ARP8 actin-related protein 8 homolog (yea  K11673     585     104      30    0.208    331     
shr:100919761 DNA fragmentation factor, 40kDa, beta pol  K02311     305     104      30    0.267    101     
shr:100920219 membrane associated guanylate kinase, WW   K06112    1474     104      30    0.207    150     
shr:100923621 TAF3 RNA polymerase II, TATA box binding   K14650     798     104      30    0.202    297     
shr:100925036 nucleobindin-2-like                                   331     104      30    0.218    142     
shr:100926396 calreticulin-like                          K08057     477     104      30    0.245    188     
shr:100928470 FYVE, RhoGEF and PH domain containing 6    K05724    1427     104      30    0.324    136     
shr:100931576 coiled-coil domain containing 50                      476     104      30    0.257    140     
shr:100934245 PC4 and SFRS1 interacting protein 1                   532     104      30    0.254    138     
shr:100913550 chromodomain helicase DNA binding protein  K11367    1823     103      29    0.229    140     
shr:100914212 A kinase (PRKA) anchor protein 12          K16528    1684     103      29    0.245    98      
shr:100915536 YTH domain containing 1                               696     103      29    0.243    70      
shr:100922471 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42  K12835     943     103      29    0.253    91      
shr:100924267 mitogen-activated protein kinase 9         K04440     424     103      29    0.217    258     
shr:100924558 PCF11, cleavage and polyadenylation facto  K14400    1549     103      29    0.231    143     
shr:100925704 ubiquitin-conjugating enzyme E2Q family m  K10582     420     103      29    0.319    94      
shr:100926195 ADP-ribosylation-like factor 6 interactin             247     103      29    0.253    154     
shr:100928702 uncharacterized LOC100928702                          152     103      29    0.235    98      
shr:100931202 KRI1 homolog (S. cerevisiae)               K14786     662     103      29    0.243    103     
shr:100932960 SEC16 homolog B (S. cerevisiae)                      1031     103      29    0.259    139     
shr:100933321 polymerase I and transcript release facto             387     103      29    0.304    92      
shr:100934511 zinc finger CCCH-type containing 4                    940     103      29    0.250    124     
shr:100913773 tudor domain containing 3                  K18404     725     102      29    0.192    151     
shr:100918831 K(lysine) acetyltransferase 6B             K11306    1753     102      29    0.242    157     
shr:100923384 topoisomerase (DNA) I                      K03163    1055     102      29    0.241    116     
shr:100925555 acidic (leucine-rich) nuclear phosphoprot             277     102      29    0.221    204     
shr:100926499 polymerase (RNA) III (DNA directed) polyp  K03024     268     102      29    0.261    157     
shr:100928025 remodeling and spacing factor 1            K11657    1410     102      29    0.271    107     
shr:100928102 natural killer-tumor recognition sequence  K12740    1482     102      29    0.262    126     
shr:100928595 ubiquitin specific peptidase 20            K11848     908     102      29    0.242    231     
shr:100930323 SURP and G patch domain containing 2       K13166    1111     102      29    0.230    239     
shr:100931282 brain abundant, membrane attached signal   K17272     364     102      29    0.258    124     
shr:100932580 Nipped-B homolog (Drosophila)              K06672    2809     102      29    0.234    107     
shr:100934926 uncharacterized LOC100934926               K11277     261     102      29    0.230    100     
shr:100913987 UPF3 regulator of nonsense transcripts ho  K14328     426     101      29    0.253    178     
shr:100915671 IWS1 homolog (S. cerevisiae)               K17498     820     101      29    0.257    171     
shr:100917182 DEAH (Asp-Glu-Ala-His) box polypeptide 16  K12813    1042     101      29    0.223    179     
shr:100917597 phosphatidylglycerophosphate synthase 1    K00995     552     101      29    0.232    164     
shr:100919340 PHD finger protein 10                                 598     101      29    0.272    147     
shr:100923640 structural maintenance of chromosomes pro            1116     101      29    0.217    143     
shr:100925821 apoptosis enhancing nuclease               K18340     332     101      29    0.235    221     
shr:100926643 ubiquitin specific peptidase 35            K11854    1052     101      29    0.281    114     
shr:100926689 BMS1 homolog, ribosome assembly protein (  K14569    1377     101      29    0.223    166     
shr:100928563 PNN-interacting serine/arginine-rich prot  K13170     814     101      29    0.280    82      
shr:100928630 uncharacterized LOC100928630                         3539     101      29    0.208    183     
shr:100929403 guanine nucleotide binding protein-like 2  K14537     722     101      29    0.203    148     
shr:100933483 serine/arginine-rich splicing factor 11    K12899     595     101      29    0.275    102     
shr:100913663 uncharacterized LOC100913663                         4907     100      29    0.243    136     
shr:100914103 nuclear receptor corepressor 2             K06065    3308     100      29    0.375    48      
shr:100915562 structural maintenance of chromosomes pro            1098     100      29    0.262    126     
shr:100916919 BCL2-associated transcription factor 1     K13087     922     100      29    0.209    91      
shr:100920888 cAMP-regulated phosphoprotein 21-like                 227     100      29    0.248    129     
shr:100924777 nucleobindin-2-like                                   482     100      29    0.204    142     
shr:100926000 BTB (POZ) domain containing 7              K10479    1122     100      29    0.221    154     
shr:100927483 bromodomain containing 4                   K11722    1379     100      29    0.236    174     
shr:100928472 zinc finger protein 800                               665     100      29    0.219    160     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]