SSDB Paralog Search Result

KEGG ID :shy:SHJG_5522 (468 a.a.)
Definition:glutamate decarboxylase; K01580 glutamate decarboxylase
Update status:T02063 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
shy:SHJG_8487 pyridoxal-dependent decarboxylase          K01592     417     336      82    0.293    355     
shy:SHJG_2796 glycine dehydrogenase                      K00281     961     122      34    0.252    294     
shy:SHJG_1945 regulatory protein                                    567     119      33    0.301    133     
shy:SHJG_3491 amino acid decarboxylase                   K13745     460     118      33    0.277    336     
shy:SHJG_p1060 CRISPR-associated helicase Cas3 family p  K07012     967     118      33    0.257    253     
shy:SHJG_6578 pyridoxal-phosphate-dependent aminotransf  K04487     389     117      33    0.251    299     
shy:SHJG_4498 hypothetical protein                                  499     112      31    0.233    270     
shy:SHJG_3502 glutamate synthase large subunit           K00265    1504     107      30    0.258    248     
shy:SHJG_0435 LuxR family transcriptional regulator                 929     103      29    0.286    238     
shy:SHJG_8354 carbon monoxide dehydrogenase large subun  K03520     725     103      29    0.271    328     
shy:SHJG_4097 hypothetical protein                                  653     101      29    0.228    246     
shy:SHJG_4053 GTP-binding protein LepA                   K03596     617     100      29    0.239    159     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]