SSDB Paralog Search Result

KEGG ID :sih:SiH_1890 (601 a.a.)
Definition:ATP-dependent DNA ligase I; K10747 DNA ligase 1
Update status:T01952 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 17 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sih:SiH_1961 putative signal transduction protein        K07744     300     123      34    0.240    229     
sih:SiH_0063 Rad50 recombination repair enzyme like pro  K03546     864     118      33    0.235    251     
sih:SiH_1881 hypothetical protein                        K09150     613     114      32    0.218    427     
sih:SiH_0379 hypothetical protein                                   153     112      31    0.270    141     
sih:SiH_1846 translation initiation factor aIF-2         K03243     600     110      31    0.233    438     
sih:SiH_0218 FAD dependent oxidoreductase                           518     108      30    0.224    281     
sih:SiH_1459 carbamoyl-phosphate synthase large subunit  K01955    1051     108      30    0.287    136     
sih:SiH_0711 type III restriction protein res subunit               666     107      30    0.227    331     
sih:SiH_1129 translation initiation factor 2 subunit al  K03237     266     107      30    0.267    120     
sih:SiH_1877 CTP synthase                                K01937     535     106      30    0.226    402     
sih:SiH_0205 Zn-dependent hydrolase, beta-lactamase fol             211     104      30    0.237    169     
sih:SiH_1049 ABC transporter                             K01990     275     104      30    0.286    259     
sih:SiH_1569 hypothetical protein                                   603     103      29    0.209    302     
sih:SiH_1733 signal recognition particle-docking protei  K03110     310     103      29    0.217    217     
sih:SiH_2350 aldehyde oxidase and xanthine dehydrogenas             685     102      29    0.206    408     
sih:SiH_0553 Cmr4 family CRISPR-associated RAMP protein  K09000     260     101      29    0.235    213     
sih:SiH_0016 hypothetical protein                                  1012     100      29    0.210    309     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]