SSDB Paralog Search Result

KEGG ID :ske:Sked_13060 (852 a.a.)
Definition:DNA ligase D/DNA polymerase LigD; K01971 DNA ligase (ATP)
Update status:T01214 (abp,abv,adl,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gtr,hlr,mlr,mrr,npa,oas,pco,pes,pfp,psq,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 112 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ske:Sked_32310 hypothetical protein                                 644     163      43    0.238    407     
ske:Sked_08020 ABC transporter ATPase                    K16786..   558     144      39    0.257    517     
ske:Sked_36830 cell division protein FtsI/penicillin-bi             645     143      38    0.246    635     
ske:Sked_06510 RCC1 domain-containing protein, alpha-tu             900     137      37    0.245    511     
ske:Sked_08760 glycosyl transferase                                 296     137      37    0.271    210     
ske:Sked_32330 coenzyme F390 synthetase                             548     137      37    0.241    536     
ske:Sked_09360 lipoprotein LpqB family protein/sporulat             590     136      37    0.259    344     
ske:Sked_05360 fibronectin type 3 domain-containing pro            1880     135      37    0.213    540     
ske:Sked_19190 amino acid adenylation enzyme/thioester             3648     132      36    0.258    561     
ske:Sked_34820 transcriptional accessory protein         K06959     816     130      35    0.264    311     
ske:Sked_20100 hypothetical protein                                 502     129      35    0.290    224     
ske:Sked_26660 hypothetical protein                                 738     126      35    0.247    324     
ske:Sked_34300 ABC transporter ATPase                    K02031..   661     126      35    0.246    426     
ske:Sked_34400 Matrixin                                             850     126      35    0.229    580     
ske:Sked_04330 carbohydrate binding protein                        1197     123      34    0.205    663     
ske:Sked_33480 hypothetical protein                                 293     123      34    0.241    294     
ske:Sked_23130 hypothetical protein                                 664     122      34    0.244    356     
ske:Sked_35280 Htaa protein                                        1212     122      34    0.231    497     
ske:Sked_11350 cysteine ABC transporter permease subuni  K16012     650     120      33    0.280    239     
ske:Sked_26640 collagen-binding protein                            2148     120      33    0.226    601     
ske:Sked_01610 hypothetical protein                                 256     119      33    0.240    225     
ske:Sked_05820 rhamnulose-1-phosphate aldolase/alcohol              689     119      33    0.256    207     
ske:Sked_07790 alpha/beta hydrolase family protein                  561     119      33    0.244    435     
ske:Sked_08730 glycosyltransferase                                  407     119      33    0.272    246     
ske:Sked_09240 hypothetical protein                                2912     118      33    0.242    790     
ske:Sked_10070 beta-glucosidase-like glycosyl hydrolase  K05349     974     117      33    0.266    342     
ske:Sked_25170 metalloendopeptidase-like membrane prote             462     117      33    0.224    201     
ske:Sked_28060 alpha-1,6-glucosidase                               2068     117      33    0.257    323     
ske:Sked_18850 pyruvate/2-oxoglutarate dehydrogenase co  K00627     442     116      32    0.267    195     
ske:Sked_19240 hypothetical protein                                 227     116      32    0.284    155     
ske:Sked_19620 excinuclease ABC subunit A                K03701     863     116      32    0.238    765     
ske:Sked_20120 excinuclease ABC subunit A                K03701     982     116      32    0.252    349     
ske:Sked_22820 UDP-N-acetylmuramoylalanine--D-glutamate  K01925     487     116      32    0.239    385     
ske:Sked_02510 nuclease (RecB family)                    K06860    1250     114      32    0.242    656     
ske:Sked_20690 pyruvate kinase (EC:2.7.1.40)             K00873     472     114      32    0.256    336     
ske:Sked_23220 ATP dependent helicase, Lhr family        K03724    1649     114      32    0.243    506     
ske:Sked_30540 hypothetical protein                                 400     114      32    0.295    146     
ske:Sked_20220 DNA polymerase I                          K02335     901     113      32    0.212    368     
ske:Sked_21280 DNA repair nucleotidyltransferase/DNA po  K14161     553     113      32    0.268    298     
ske:Sked_01930 N-acetylglucosamine-6-phosphate deacetyl  K01443     403     112      31    0.258    391     
ske:Sked_18250 hypothetical protein                                 436     112      31    0.302    139     
ske:Sked_23290 dihydrodipicolinate synthase              K01714     308     112      31    0.273    260     
ske:Sked_27800 alpha/beta superfamily hydrolase/acyltra             301     112      31    0.274    208     
ske:Sked_32440 hypothetical protein                                 475     112      31    0.267    202     
ske:Sked_03810 hypothetical protein                                 643     111      31    0.244    316     
ske:Sked_06370 RCC1 domain-containing protein, alpha-tu             737     111      31    0.244    377     
ske:Sked_13980 DNA primase                               K02316     656     111      31    0.247    288     
ske:Sked_30080 hypothetical protein                                 616     111      31    0.305    203     
ske:Sked_33880 small-conductance mechanosensitive chann             727     111      31    0.220    255     
ske:Sked_04290 carbohydrate binding protein                        1410     110      31    0.265    166     
ske:Sked_18000 carbamoyl-phosphate synthase large subun  K01955    1107     110      31    0.255    216     
ske:Sked_18990 ATP-dependent helicase HrpB               K03579     839     110      31    0.264    398     
ske:Sked_13260 degV family protein                                  298     109      31    0.291    165     
ske:Sked_13520 hypothetical protein                                 628     109      31    0.255    153     
ske:Sked_25880 trypsin-like serine protease with C-term  K08372     537     109      31    0.228    543     
ske:Sked_26340 fructose-2,6-bisphosphatase                          235     109      31    0.272    228     
ske:Sked_15820 serine/threonine protein kinase           K08884     721     108      30    0.233    636     
ske:Sked_16050 acyl-CoA synthetase (NDP forming)                    934     108      30    0.232    383     
ske:Sked_21320 hypothetical protein                                 660     108      30    0.259    294     
ske:Sked_31160 hypothetical protein                                 526     108      30    0.226    541     
ske:Sked_32680 DNA topoisomerase I                       K03168     962     108      30    0.235    255     
ske:Sked_03700 carbohydrate-binding protein              K02027     464     107      30    0.261    249     
ske:Sked_05620 fibronectin type III domain-containing p            2052     107      30    0.240    267     
ske:Sked_11390 ribonuclease, Rne/Rng family              K08300    1265     107      30    0.217    480     
ske:Sked_25650 FG-GAP repeat protein                               1082     107      30    0.241    452     
ske:Sked_26450 sugar kinase, ribokinase                  K00847     317     107      30    0.250    308     
ske:Sked_27720 beta-galactosidase                                   924     107      30    0.245    273     
ske:Sked_04070 hypothetical protein                                 404     106      30    0.281    455     
ske:Sked_28140 hypothetical protein                                 539     106      30    0.257    230     
ske:Sked_31420 hypothetical protein                                 953     106      30    0.261    341     
ske:Sked_33910 phosphoribosyl transferase family protei             530     106      30    0.259    212     
ske:Sked_20550 methyl-accepting chemotaxis protein                  733     105      30    0.264    250     
ske:Sked_21940 Iron-regulated ABC transporter permease   K09015     417     105      30    0.240    362     
ske:Sked_26570 hypothetical protein                                1104     105      30    0.222    325     
ske:Sked_27590 aminoglycoside phosphotransferase                    505     105      30    0.233    223     
ske:Sked_27760 Platelet-activating factor acetylhydrola             474     105      30    0.300    160     
ske:Sked_34690 hypothetical protein                      K09164     303     105      30    0.274    223     
ske:Sked_34850 hypothetical protein                                 303     105      30    0.289    190     
ske:Sked_04010 hypothetical protein                                 874     104      30    0.343    67      
ske:Sked_04400 carbohydrate binding protein                         136     104      30    0.291    141     
ske:Sked_08110 multidrug ABC transporter ATPase          K01990     318     104      30    0.233    257     
ske:Sked_26510 luxR family transcriptional regulator                903     104      30    0.329    85      
ske:Sked_26590 hypothetical protein                                 599     104      30    0.264    265     
ske:Sked_01640 hypothetical protein                                 800     103      29    0.230    391     
ske:Sked_04710 DNA polymerase III subunit gamma/tau      K02343     872     103      29    0.249    285     
ske:Sked_06430 cellobiose phosphorylase                            1145     103      29    0.234    501     
ske:Sked_09680 HNH endonuclease                                     584     103      29    0.224    192     
ske:Sked_16310 IMP dehydrogenase family protein          K00088     484     103      29    0.239    247     
ske:Sked_19360 aliphatic sulfonate ABC transporter subs  K15553     365     103      29    0.257    148     
ske:Sked_24100 hypothetical protein                      K14941     284     103      29    0.296    189     
ske:Sked_29150 hypothetical protein                                 297     103      29    0.266    263     
ske:Sked_33530 extracellular nuclease                              1591     103      29    0.228    435     
ske:Sked_28330 signal transduction histidine kinase                 480     102      29    0.275    207     
ske:Sked_31300 glycosyl transferase                                 531     102      29    0.283    166     
ske:Sked_01410 pyruvate dehydrogenase (cytochrome) (EC:  K00156     591     101      29    0.282    110     
ske:Sked_02670 hypothetical protein                                 217     101      29    0.255    188     
ske:Sked_05210 dehydrogenase                                        403     101      29    0.275    222     
ske:Sked_06200 D-xylulose kinase                         K00854     492     101      29    0.253    158     
ske:Sked_13610 hypothetical protein                                 431     101      29    0.271    221     
ske:Sked_14250 beta-galactosidase                                   802     101      29    0.232    444     
ske:Sked_15460 2-oxoglutarate dehydrogenase E2 componen  K00658     581     101      29    0.194    237     
ske:Sked_17650 Recombination protein MgsA                K07478     490     101      29    0.272    217     
ske:Sked_19010 ABC transporter ATPase                               555     101      29    0.228    337     
ske:Sked_29270 sugar kinase                                         576     101      29    0.237    397     
ske:Sked_35510 DNA polymerase III subunit epsilon-like   K02342     611     101      29    0.260    215     
ske:Sked_06650 LacI family transcriptional regulator     K02529     355     100      29    0.283    138     
ske:Sked_13390 hypothetical protein                                 286     100      29    0.270    222     
ske:Sked_14830 alpha-mannosidase                         K01191    1002     100      29    0.231    389     
ske:Sked_19690 hypothetical protein                                 285     100      29    0.302    189     
ske:Sked_20130 glucoamylase                                         643     100      29    0.246    341     
ske:Sked_32150 cell wall-associated hydrolase                       475     100      29    0.223    238     
ske:Sked_36150 collagen-binding protein                             727     100      29    0.246    333     

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