SSDB Paralog Search Result

KEGG ID :ske:Sked_13060 (852 a.a.)
Definition:DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01214 (acx,baco,bbx,bby,bgp,bpet,bue,cbaa,cbab,cbw,ceo,chz,cmq,csx,dmt,fne,fnt,fpi,fpj,fpm,fpx,fpz,hcc,hcd,kpv,ksa,kvq,lat,lho,mcan,mcg,mpw,msr,msx,myv,pman,ppro,pses,ron,sbw,tbn,tig,txi,wcl,win,yal,yet,yew,yfr,yin,ykr,yro,yru : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 6 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ske:Sked_18250 hypothetical protein                                 436     112      31    0.302    139     
ske:Sked_30080 hypothetical protein                                 616     111      31    0.305    203     
ske:Sked_27760 Platelet-activating factor acetylhydrola             474     105      30    0.300    160     
ske:Sked_04010 hypothetical protein                                 874     104      30    0.343    67      
ske:Sked_26510 luxR family transcriptional regulator                903     104      30    0.329    85      
ske:Sked_19690 hypothetical protein                                 285     100      29    0.302    189     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]