SSDB Paralog Search Result

KEGG ID :smd:Smed_2631 (865 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00555 (abal,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,camr,care,cbac,cbv,ccw,cea,cis,cll,clm,cln,clq,clr,cmx,cpel,cvo,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppul,ppv,pseo,psim,pspu,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 5 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
smd:Smed_4303 DNA ligase D                                          817    2141     494    0.421    856     
smd:Smed_1305 DNA polymerase LigD ligase region          K01971     343     717     169    0.385    330     
smd:Smed_4835 ATP dependent DNA ligase                   K01971     275     544     130    0.367    267     
smd:Smed_4122 ATP-dependent DNA ligase (EC:6.5.1.1)                 355     367      90    0.278    349     
smd:Smed_1117 ATP-dependent Clp protease ATP-binding pr  K03694     838     106      30    0.320    97      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]