SSDB Paralog Search Result

KEGG ID :sme:SMc03959 (865 a.a.)
Definition:hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00058 (acx,baco,bbx,bby,bgp,bpet,bue,cbaa,cbab,ceo,chz,cmq,csx,dmt,fne,fnt,fpi,fpj,fpm,fpx,fpz,hcc,hcd,kpv,ksa,lat,lho,mcan,mcg,mpw,msr,msx,myv,pman,ppro,pses,ron,sbw,shd,tbn,tig,txi,wcl,win,yal,yfr,yin,ykr,yro,yru : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sme:SM_b20685 hypothetical protein                                  818    2091     482    0.415    863     
sme:SMa0414 hypothetical protein                         K01971     556    1518     352    0.465    557     
sme:SM_b21044 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     636    1240     288    0.366    629     
sme:SMa0424 ATP-dependent DNA ligase                     K01971     346     714     169    0.424    304     
sme:SM_b20912 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     364     693     164    0.402    301     
sme:SMa0417 hypothetical protein                                    285     531     127    0.339    354     
sme:SM_b20008 ATP-dependent DNA ligase (EC:6.5.1.1)                 355     377      92    0.280    346     
sme:SMc03177 ATP-dependent DNA ligase (EC:6.5.1.1)       K10747     537     236      60    0.260    354     
sme:SMa0817 oxidoreductase FixC                          K00313     435     105      30    0.318    88      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]