SSDB Paralog Search Result

KEGG ID :sme:SMc03959 (865 a.a.)
Definition:hypothetical protein; K01971 DNA ligase (ATP)
Update status:T00058 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sme:SM_b20685 hypothetical protein                                  818    2091     482    0.415    863     
sme:SMa0414 hypothetical protein                         K01971     556    1518     352    0.465    557     
sme:SM_b21044 ATP-dependent DNA ligase (EC:6.5.1.1)                 636    1240     288    0.366    629     
sme:SMa0424 ATP-dependent DNA ligase                                346     714     169    0.424    304     
sme:SM_b20912 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     364     693     164    0.402    301     
sme:SMa0417 hypothetical protein                                    285     531     127    0.339    354     
sme:SM_b20008 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     355     377      92    0.280    346     
sme:SMc03177 ATP-dependent DNA ligase (EC:6.5.1.1)       K01971     537     236      60    0.260    354     
sme:SMa0817 oxidoreductase FixC                          K00313     435     105      30    0.318    88      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]