SSDB Paralog Search Result

KEGG ID :smel:SM2011_b20393 (418 a.a.)
Definition:Putative ribulose bisphosphate carboxylaseoxygenase,large subunit (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain
Update status:T02497 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,koy,kpa,kps,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,pmum,ppq,psq,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
smel:SM2011_b20198 Putative ribulose-1,5-bisphosphate c  K01601     486     439     106    0.284    429     
smel:SM2011_b21298 hypothetical protein,possibly export  K06894    1815     138      37    0.256    242     
smel:SM2011_b21021 Putative transcriptional regulator    K11531     315     116      32    0.273    99      
smel:SM2011_c01406 Transcription regulator GntR family              472     109      31    0.331    157     
smel:SM2011_c00501 hypothetical protein                             294     108      30    0.304    135     
smel:SM2011_c01344 putative biotin carboxyl carrier pro  K02160     158     108      30    0.284    88      
smel:SM2011_a2331 KdpB potassium-transporting ATPase B   K01547     680     107      30    0.272    184     
smel:SM2011_b20152 Hypothetical protein                             572     106      30    0.256    176     
smel:SM2011_b20023 putative 5-oxoprolinase (EC:3.5.2.9)  K01469    1205     105      30    0.265    234     
smel:SM2011_c00293 putative homoserine dehydrogenase (E  K00003     440     104      30    0.259    162     
smel:SM2011_b20107 hypothetical protein                             318     103      29    0.316    117     
smel:SM2011_c02356 Putative branched chain amino acid b  K01999     390     101      29    0.222    279     
smel:SM2011_b20990 putative membrane protein necessary   K07403     460     100      29    0.263    175     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]