SSDB Paralog Search Result

KEGG ID :smi:BN406_00784 (344 a.a.)
Definition:DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD
Update status:T02332 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
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Search Result : 15 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
smi:BN406_01776 DNA polymerase LigD ligase region       K01971     307     1852 (    -)     428    0.879    306      -> 
smi:BN406_03945 ATP-dependent DNA ligase                K01971     290     1002 (    -)     234    0.553    284      -> 
smi:BN406_05469 hypothetical protein                    K01971     162      966 (    -)     226    0.879    157      -> 
smi:BN406_05994 putative ATP-dependent DNA ligase prote K01971     628      748 (    -)     176    0.382    325      -> 
smi:BN406_02600 hypothetical protein                    K01971     865      716 (    -)     169    0.388    348      -> 
smi:BN406_05307 hypothetical protein                               818      705 (    -)     167    0.391    307      -> 
smi:BN406_03940 hypothetical protein                    K01971     878      697 (    -)     165    0.367    324      -> 
smi:BN406_05076 putative ATP-dependent DNA ligase prote            167      555 (    -)     132    0.654    133      -> 
smi:BN406_05468 hypothetical protein                    K01971     111      392 (    -)      95    0.617    94       -> 
smi:BN406_05125 ATP-dependent DNA ligase                           355      297 (    -)      74    0.312    321      -> 
smi:BN406_05075 unnamed protein product                             40      245 (    -)      62    0.825    40       -> 
smi:BN406_02764 ATP-dependent DNA ligase                K10747     537      219 (    -)      56    0.296    186      -> 
smi:BN406_03946 hypothetical protein                                59      104 (    -)      30    0.436    39       -> 
smi:BN406_03798 Oligopeptide transport ATP-binding prot            332      100 (    -)      29    0.344    90       -> 
smi:BN406_05679 LytTR family two component transcriptio K02477     260      100 (    -)      29    0.369    103      -> 

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