SSDB Paralog Search Result

KEGG ID :sml:Smlt2530 (849 a.a.)
Definition:DNA ligase family protein; K01971 DNA ligase (ATP)
Update status:T00718 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 21 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sml:Smlt0053 ATP-dependent DNA ligase                    K01971     828    2467     568    0.473    852     
sml:Smlt3530 ATP-dependent DNA ligase (EC:6.5.1.1)       K01971     535     278      69    0.328    247     
sml:Smlt2297 RNA polymerase sigma-54 factor (sigma-N)    K03092     469     132      36    0.245    388     
sml:Smlt3142 NAD-dependent DNA ligase LigA               K01972     821     120      33    0.244    562     
sml:Smlt1578 oxidoreductase                              K09471     425     118      33    0.234    308     
sml:Smlt2737 glycine-rich surface autotransporter prote            4127     118      33    0.239    493     
sml:Smlt3935 glycosyltransferase                                   1217     117      33    0.215    455     
sml:Smlt1541 two-component system, sensor histidine kin             469     109      31    0.268    228     
sml:Smlt1762 ferric siderophore receptor protein         K16088     734     109      31    0.268    190     
sml:Smlt1976 hypothetical protein                                  2643     109      31    0.228    552     
sml:Smlt0398 arginyl-tRNA synthetase                     K01887     562     108      30    0.233    373     
sml:Smlt0159 nitrogen regulation protein NR(I)           K07712     482     106      30    0.257    300     
sml:Smlt0684 phosphoribosylformylglycinamidine synthase  K01952    1294     105      30    0.262    149     
sml:Smlt4452 cell surface hemaggluttinin protein         K15125    3515     105      30    0.244    307     
sml:Smlt2295 nitrogen regulation protein NR(I)           K10941     501     104      30    0.257    191     
sml:Smlt2245 bifunctional aconitate hydratase 2/2-methy  K01682     863     103      29    0.231    381     
sml:Smlt2117 acetyltransferase                                      242     102      29    0.245    241     
sml:Smlt1425 GGDEF family signalling protein             K13069     481     101      29    0.226    265     
sml:Smlt3419 tryptophan synthase subunit beta (EC:4.2.1  K01696     405     101      29    0.232    367     
sml:Smlt4244 50S ribosomal protein L11 methyltransferas  K02687     306     101      29    0.301    156     
sml:Smlt2822 isochorismate synthase (EC:5.4.4.2)         K02361     397     100      29    0.267    232     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]